Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm25774-201ENSMUST00000116717 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm22102-201ENSMUST00000116730 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm23177-201ENSMUST00000116784 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24193-201ENSMUST00000116801 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24744-201ENSMUST00000116833 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24427-201ENSMUST00000116896 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm22346-201ENSMUST00000116918 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm23606-201ENSMUST00000116938 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm22029-201ENSMUST00000116940 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm26298-201ENSMUST00000116956 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm23844-201ENSMUST00000116959 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24484-201ENSMUST00000117009 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm25347-201ENSMUST00000117026 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm22112-201ENSMUST00000117032 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm26027-201ENSMUST00000122725 268 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm23260-201ENSMUST00000158317 172 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm26171-201ENSMUST00000158422 131 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm26404-201ENSMUST00000158498 109 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm22991-201ENSMUST00000178126 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm25754-201ENSMUST00000178653 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm22419-201ENSMUST00000178780 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24802-201ENSMUST00000178897 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm25208-201ENSMUST00000178964 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24567-201ENSMUST00000179294 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm23943-201ENSMUST00000179712 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm25228-201ENSMUST00000180121 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm23304-201ENSMUST00000180209 121 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm37670-201ENSMUST00000193622 229 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm4644-201ENSMUST00000197587 400 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm42988-201ENSMUST00000198116 225 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm44338-201ENSMUST00000198614 110 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm42428-201ENSMUST00000198677 302 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm19096-201ENSMUST00000209705 766 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Msx1P13297 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm25895-201ENSMUST00000083714 100 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Gm24164-201ENSMUST00000093663 104 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Msx1P13297 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Msx1P13297 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.7□□□□□ -1.66
Msx1P13297 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Msx1P13297 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Msx1P13297 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx1P13297 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msx1P13297 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msx1P13297 Gm15613-201ENSMUST00000118396 326 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm15183-201ENSMUST00000118933 348 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.69□□□□□ -1.66
Msx1P13297 Gm23331-201ENSMUST00000157423 108 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm26085-201ENSMUST00000157900 116 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm23023-201ENSMUST00000158767 109 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msx1P13297 Gm22775-201ENSMUST00000177630 120 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm23569-201ENSMUST00000180120 120 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm19503-201ENSMUST00000187109 241 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm29308-201ENSMUST00000188863 315 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm28537-201ENSMUST00000189026 315 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm29631-201ENSMUST00000191065 315 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Trbv6-201ENSMUST00000193743 276 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm38332-201ENSMUST00000194189 147 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Msx1P13297 Gm10400-201ENSMUST00000203920 3835 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm18462-201ENSMUST00000208112 417 ntBASIC4.69□□□□□ -1.66
Msx1P13297 AC160134.1-201ENSMUST00000213450 551 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Gm24948-201ENSMUST00000082866 207 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx1P13297 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Msx1P13297 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Msx1P13297 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.69□□□□□ -1.66
Msx1P13297 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Msx1P13297 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msx1P13297 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Gm13797-201ENSMUST00000121792 120 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Gm12071-201ENSMUST00000121968 469 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Gm26098-201ENSMUST00000157247 288 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Gm27528-201ENSMUST00000183544 205 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Gm29104-201ENSMUST00000186304 222 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Gm18441-201ENSMUST00000223539 617 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Gm5215-201ENSMUST00000054380 405 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Olfr1120-202ENSMUST00000215163 4404 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Msx1P13297 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms