Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RaraP11416 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RaraP11416 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RaraP11416 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.6□□□□□ -1.67
RaraP11416 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RaraP11416 Gm24839-201ENSMUST00000122602 107 ntBASIC4.6□□□□□ -1.67
RaraP11416 Gm22766-201ENSMUST00000158372 99 ntBASIC4.6□□□□□ -1.67
RaraP11416 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.6□□□□□ -1.67
RaraP11416 Gm15796-201ENSMUST00000162135 204 ntBASIC4.6□□□□□ -1.67
RaraP11416 Gm17020-201ENSMUST00000172274 274 ntBASIC4.6□□□□□ -1.67
RaraP11416 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RaraP11416 Mir7062-201ENSMUST00000185038 66 ntBASIC4.6□□□□□ -1.67
RaraP11416 Gm42578-201ENSMUST00000199960 194 ntBASIC4.6□□□□□ -1.67
RaraP11416 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.6□□□□□ -1.67
RaraP11416 Gm23464-201ENSMUST00000083145 147 ntBASIC4.6□□□□□ -1.67
RaraP11416 Mir28a-201ENSMUST00000083560 86 ntBASIC4.6□□□□□ -1.67
RaraP11416 Mir32-201ENSMUST00000083610 70 ntBASIC4.6□□□□□ -1.67
RaraP11416 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RaraP11416 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.6□□□□□ -1.67
RaraP11416 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RaraP11416 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RaraP11416 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.59□□□□□ -1.67
RaraP11416 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RaraP11416 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RaraP11416 Gm14878-201ENSMUST00000118167 293 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm14586-201ENSMUST00000119571 408 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm13581-201ENSMUST00000120675 278 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm22789-201ENSMUST00000157884 130 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm24898-201ENSMUST00000158133 106 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm22156-201ENSMUST00000158409 141 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm25051-201ENSMUST00000158602 249 ntBASIC4.59□□□□□ -1.67
RaraP11416 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RaraP11416 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RaraP11416 Gm22118-201ENSMUST00000175593 171 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm20674-201ENSMUST00000177452 369 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.59□□□□□ -1.67
RaraP11416 Gm27883-201ENSMUST00000183941 102 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm23925-202ENSMUST00000188429 132 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm8599-201ENSMUST00000193033 457 ntBASIC4.59□□□□□ -1.67
RaraP11416 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RaraP11416 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.59□□□□□ -1.67
RaraP11416 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
RaraP11416 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RaraP11416 Gm29774-201ENSMUST00000219270 436 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.59□□□□□ -1.67
RaraP11416 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.59□□□□□ -1.67
RaraP11416 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RaraP11416 Gm22806-201ENSMUST00000082738 136 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm25698-201ENSMUST00000082897 107 ntBASIC4.59□□□□□ -1.67
RaraP11416 Gm22353-201ENSMUST00000083918 136 ntBASIC4.59□□□□□ -1.67
RaraP11416 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.59□□□□□ -1.67
RaraP11416 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
RaraP11416 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
RaraP11416 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
RaraP11416 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.68
RaraP11416 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.59□□□□□ -1.68
RaraP11416 Gm36944-201ENSMUST00000192257 2759 ntBASIC4.59□□□□□ -1.68
RaraP11416 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RaraP11416 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
RaraP11416 Gm12010-201ENSMUST00000122400 2017 ntBASIC4.58□□□□□ -1.68
RaraP11416 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.58□□□□□ -1.68
RaraP11416 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.58□□□□□ -1.68
RaraP11416 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RaraP11416 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
RaraP11416 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm25538-201ENSMUST00000101943 107 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm14067-201ENSMUST00000119340 314 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm5123-201ENSMUST00000121905 837 ntBASIC4.58□□□□□ -1.68
RaraP11416 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.58□□□□□ -1.68
RaraP11416 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RaraP11416 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC4.58□□□□□ -1.68
RaraP11416 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm5755-201ENSMUST00000152394 837 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm25392-201ENSMUST00000157335 297 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm23902-201ENSMUST00000157571 134 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm24676-201ENSMUST00000158758 75 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm24264-201ENSMUST00000179835 94 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm27476-201ENSMUST00000183366 104 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm27690-201ENSMUST00000184596 126 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm5329-201ENSMUST00000186898 463 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm42647-201ENSMUST00000195939 459 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm43649-201ENSMUST00000196596 391 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm45006-201ENSMUST00000206078 690 ntBASIC4.58□□□□□ -1.68
RaraP11416 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RaraP11416 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm8274-201ENSMUST00000219820 463 ntBASIC4.58□□□□□ -1.68
RaraP11416 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.58□□□□□ -1.68
RaraP11416 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RaraP11416 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RaraP11416 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RaraP11416 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
RaraP11416 Gm22784-201ENSMUST00000104088 132 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm23322-201ENSMUST00000104464 167 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm24067-201ENSMUST00000104514 85 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm14537-201ENSMUST00000117464 599 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm14770-201ENSMUST00000122197 312 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.57□□□□□ -1.68
RaraP11416 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.57□□□□□ -1.68
RaraP11416 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms