Protein–RNA interactions for Protein: P10404

MLV-related proviral Env polyprotein, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P10404 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
P10404 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
P10404 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.81□□□□□ -1.8
P10404 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
P10404 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
P10404 Gm22498-201ENSMUST00000104497 86 ntBASIC3.81□□□□□ -1.8
P10404 Gm14067-201ENSMUST00000119340 314 ntBASIC3.81□□□□□ -1.8
P10404 Gm14119-201ENSMUST00000119511 235 ntBASIC3.81□□□□□ -1.8
P10404 Gm14770-201ENSMUST00000122197 312 ntBASIC3.81□□□□□ -1.8
P10404 Gm16060-201ENSMUST00000153140 478 ntBASIC3.81□□□□□ -1.8
P10404 Gm23743-201ENSMUST00000157389 274 ntBASIC3.81□□□□□ -1.8
P10404 Gm25223-201ENSMUST00000158200 110 ntBASIC3.81□□□□□ -1.8
P10404 Gm24885-201ENSMUST00000158783 270 ntBASIC3.81□□□□□ -1.8
P10404 Gm21850-201ENSMUST00000179792 359 ntBASIC3.81□□□□□ -1.8
P10404 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.81□□□□□ -1.8
P10404 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
P10404 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC3.81□□□□□ -1.8
P10404 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.81□□□□□ -1.8
P10404 AC159231.1-201ENSMUST00000225365 226 ntBASIC3.81□□□□□ -1.8
P10404 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
P10404 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
P10404 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
P10404 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.81□□□□□ -1.8
P10404 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.81□□□□□ -1.8
P10404 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.81□□□□□ -1.8
P10404 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
P10404 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
P10404 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
P10404 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC3.81□□□□□ -1.8
P10404 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.8□□□□□ -1.8
P10404 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
P10404 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.8□□□□□ -1.8
P10404 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.8□□□□□ -1.8
P10404 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
P10404 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
P10404 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.8□□□□□ -1.8
P10404 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC3.8□□□□□ -1.8
P10404 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
P10404 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
P10404 Gm22936-201ENSMUST00000103955 126 ntBASIC3.8□□□□□ -1.8
P10404 Gm14537-201ENSMUST00000117464 599 ntBASIC3.8□□□□□ -1.8
P10404 Gm15148-201ENSMUST00000117602 156 ntBASIC3.8□□□□□ -1.8
P10404 Gm11693-201ENSMUST00000119625 565 ntBASIC3.8□□□□□ -1.8
P10404 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.8□□□□□ -1.8
P10404 Gm15263-201ENSMUST00000121556 642 ntBASIC3.8□□□□□ -1.8
P10404 Gm23887-201ENSMUST00000122683 172 ntBASIC3.8□□□□□ -1.8
P10404 Gm13092-201ENSMUST00000136346 260 ntBASIC3.8□□□□□ -1.8
P10404 Gm22321-201ENSMUST00000157152 104 ntBASIC3.8□□□□□ -1.8
P10404 Gm24113-201ENSMUST00000157477 276 ntBASIC3.8□□□□□ -1.8
P10404 Gm26414-201ENSMUST00000157674 269 ntBASIC3.8□□□□□ -1.8
P10404 Gm22447-201ENSMUST00000158155 92 ntBASIC3.8□□□□□ -1.8
P10404 Gm22766-201ENSMUST00000158372 99 ntBASIC3.8□□□□□ -1.8
P10404 Mir6338-201ENSMUST00000183389 109 ntBASIC3.8□□□□□ -1.8
P10404 Gm45006-201ENSMUST00000206078 690 ntBASIC3.8□□□□□ -1.8
P10404 Gm5002-201ENSMUST00000207145 223 ntBASIC3.8□□□□□ -1.8
P10404 Gm19096-201ENSMUST00000209705 766 ntBASIC3.8□□□□□ -1.8
P10404 Gm45651-201ENSMUST00000210857 335 ntBASIC3.8□□□□□ -1.8
P10404 Gm29774-201ENSMUST00000219270 436 ntBASIC3.8□□□□□ -1.8
P10404 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.8□□□□□ -1.8
P10404 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
P10404 Gm26457-201ENSMUST00000082678 78 ntBASIC3.8□□□□□ -1.8
P10404 Gm23517-201ENSMUST00000082830 192 ntBASIC3.8□□□□□ -1.8
P10404 Mir134-201ENSMUST00000083492 71 ntBASIC3.8□□□□□ -1.8
P10404 Gm22828-201ENSMUST00000083768 107 ntBASIC3.8□□□□□ -1.8
P10404 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.8□□□□□ -1.8
P10404 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
P10404 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
P10404 Gm37764-201ENSMUST00000194664 2150 ntBASIC3.8□□□□□ -1.8
P10404 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
P10404 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
P10404 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
P10404 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
P10404 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
P10404 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
P10404 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
P10404 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
P10404 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.79□□□□□ -1.8
P10404 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P10404 Gm26500-201ENSMUST00000101867 106 ntBASIC3.79□□□□□ -1.8
P10404 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
P10404 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
P10404 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.79□□□□□ -1.8
P10404 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.79□□□□□ -1.8
P10404 Gm23184-201ENSMUST00000122594 131 ntBASIC3.79□□□□□ -1.8
P10404 Gm22098-201ENSMUST00000157930 85 ntBASIC3.79□□□□□ -1.8
P10404 Gm25456-201ENSMUST00000157952 109 ntBASIC3.79□□□□□ -1.8
P10404 Gm24392-201ENSMUST00000158136 103 ntBASIC3.79□□□□□ -1.8
P10404 Gm22611-201ENSMUST00000158288 150 ntBASIC3.79□□□□□ -1.8
P10404 Gm24667-201ENSMUST00000158938 103 ntBASIC3.79□□□□□ -1.8
P10404 Gm16545-201ENSMUST00000161968 463 ntBASIC3.79□□□□□ -1.8
P10404 Gm17100-201ENSMUST00000168963 272 ntBASIC3.79□□□□□ -1.8
P10404 Gm22308-201ENSMUST00000177609 107 ntBASIC3.79□□□□□ -1.8
P10404 Gm22243-201ENSMUST00000178754 120 ntBASIC3.79□□□□□ -1.8
P10404 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.79□□□□□ -1.8
P10404 Gm27645-201ENSMUST00000183348 77 ntBASIC3.79□□□□□ -1.8
P10404 Mir8106-201ENSMUST00000184520 139 ntBASIC3.79□□□□□ -1.8
P10404 Gm2950-201ENSMUST00000185530 520 ntBASIC3.79□□□□□ -1.8
P10404 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P10404 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
P10404 Gm44521-201ENSMUST00000206469 217 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms