Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Gm24546-201ENSMUST00000158652 102 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Gm17929-201ENSMUST00000186851 627 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Gm29516-201ENSMUST00000190402 468 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Gm37037-201ENSMUST00000194475 424 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.5□□□□□ -2.01
Chmp6P0C0A3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.5□□□□□ -2.01
Chmp6P0C0A3 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 AC161758.1-201ENSMUST00000226123 310 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Mir350-201ENSMUST00000083639 99 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm12697-201ENSMUST00000118008 667 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm11813-201ENSMUST00000118586 291 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm15760-201ENSMUST00000119553 283 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm13482-201ENSMUST00000119842 254 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm14736-201ENSMUST00000121470 336 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm24836-201ENSMUST00000122609 108 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Mir5099-201ENSMUST00000175257 74 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm22131-201ENSMUST00000178415 94 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm23648-201ENSMUST00000180301 107 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm35570-201ENSMUST00000198730 681 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm43232-201ENSMUST00000201346 364 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm46136-201ENSMUST00000214730 565 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm18488-201ENSMUST00000215082 364 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm25796-201ENSMUST00000082645 163 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm22265-201ENSMUST00000082947 116 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm23506-201ENSMUST00000083077 107 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm25628-201ENSMUST00000084002 105 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.49□□□□□ -2.01
Chmp6P0C0A3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm13343-201ENSMUST00000116474 105 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm23476-201ENSMUST00000158881 274 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm6788-201ENSMUST00000166459 270 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm26177-201ENSMUST00000178683 107 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm21758-201ENSMUST00000179336 819 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm17946-201ENSMUST00000186856 538 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm29647-201ENSMUST00000188795 666 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm20832-201ENSMUST00000189076 665 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm19891-201ENSMUST00000189771 303 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm28241-201ENSMUST00000190916 235 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm28504-201ENSMUST00000190977 666 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm31511-201ENSMUST00000193134 657 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm35843-201ENSMUST00000193716 666 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm30638-201ENSMUST00000195570 656 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm37102-201ENSMUST00000195740 1105 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm36728-201ENSMUST00000195782 665 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm18341-201ENSMUST00000197538 622 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm17911-201ENSMUST00000210806 877 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm45344-201ENSMUST00000211610 341 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm25411-201ENSMUST00000083760 151 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Mir465-201ENSMUST00000093563 74 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.48□□□□□ -2.01
Chmp6P0C0A3 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm14073-201ENSMUST00000117344 381 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm11784-201ENSMUST00000118568 474 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm12825-201ENSMUST00000120249 563 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm2768-201ENSMUST00000121062 250 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm14848-201ENSMUST00000121850 467 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm12045-201ENSMUST00000122122 573 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm38213-201ENSMUST00000193203 173 ntBASIC2.47□□□□□ -2.01
Chmp6P0C0A3 Gm7871-201ENSMUST00000195346 618 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms