Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.35□□□□□ -1.87
Col3a1P08121 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col3a1P08121 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.35□□□□□ -1.87
Col3a1P08121 Gm43652-201ENSMUST00000196219 675 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm45063-201ENSMUST00000203726 472 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm44794-201ENSMUST00000206550 411 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 AC105407.3-201ENSMUST00000224161 648 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col3a1P08121 Snora23-201ENSMUST00000082517 184 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 AC160115.1-201ENSMUST00000224678 1574 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.35□□□□□ -1.87
Col3a1P08121 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col3a1P08121 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm25806-201ENSMUST00000122782 122 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm25866-201ENSMUST00000158245 112 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm9071-201ENSMUST00000165915 474 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm25451-201ENSMUST00000177832 121 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm27640-201ENSMUST00000184580 147 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm28900-201ENSMUST00000185232 156 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 Gm43114-201ENSMUST00000198298 343 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm45387-201ENSMUST00000209792 632 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm45530-201ENSMUST00000211658 225 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.35□□□□□ -1.87
Col3a1P08121 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 AC154328.1-201ENSMUST00000225875 307 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Gm26458-201ENSMUST00000082832 128 ntBASIC3.35□□□□□ -1.87
Col3a1P08121 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
Col3a1P08121 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.34□□□□□ -1.87
Col3a1P08121 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col3a1P08121 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Col3a1P08121 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col3a1P08121 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col3a1P08121 Gm37664-201ENSMUST00000194607 3813 ntBASIC3.34□□□□□ -1.87
Col3a1P08121 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.34□□□□□ -1.88
Col3a1P08121 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col3a1P08121 Gm24274-201ENSMUST00000116787 124 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm14593-201ENSMUST00000119948 294 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col3a1P08121 Gm21809-201ENSMUST00000178495 468 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm25944-201ENSMUST00000178758 94 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.34□□□□□ -1.88
Col3a1P08121 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Mir378a-201ENSMUST00000198300 66 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm45375-201ENSMUST00000210338 280 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm6842-201ENSMUST00000211361 390 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm20304-201ENSMUST00000218168 444 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col3a1P08121 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col3a1P08121 Gm23404-201ENSMUST00000082543 97 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm25202-201ENSMUST00000082838 191 ntBASIC3.34□□□□□ -1.88
Col3a1P08121 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Mir693-201ENSMUST00000102187 89 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm15733-201ENSMUST00000132957 242 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm26354-201ENSMUST00000158221 129 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Col3a1P08121 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm20660-201ENSMUST00000177515 289 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm37807-201ENSMUST00000194310 190 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm43070-201ENSMUST00000196938 415 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm43976-201ENSMUST00000203637 235 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm44687-201ENSMUST00000204975 235 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.33□□□□□ -1.88
Col3a1P08121 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col3a1P08121 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms