Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm28591-201ENSMUST00000185259 183 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cbx4O55187 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.24□□□□□ -1.89
Cbx4O55187 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.24□□□□□ -1.89
Cbx4O55187 Gm43723-201ENSMUST00000196886 189 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Gm44324-201ENSMUST00000198517 135 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Gm43472-201ENSMUST00000200175 154 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cbx4O55187 Gm10237-201ENSMUST00000078393 273 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cbx4O55187 Gm26446-201ENSMUST00000082455 103 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cbx4O55187 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cbx4O55187 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.24□□□□□ -1.89
Cbx4O55187 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cbx4O55187 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cbx4O55187 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cbx4O55187 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cbx4O55187 Gm22115-201ENSMUST00000103976 133 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm23923-201ENSMUST00000104108 133 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm15231-201ENSMUST00000119174 447 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cbx4O55187 Gm3104-201ENSMUST00000171004 473 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm8207-201ENSMUST00000171204 502 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm28860-201ENSMUST00000188103 313 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm19620-201ENSMUST00000195972 434 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.23□□□□□ -1.89
Cbx4O55187 Gm44513-201ENSMUST00000206811 439 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm45420-201ENSMUST00000211243 425 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cbx4O55187 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cbx4O55187 Gm23404-201ENSMUST00000082543 97 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm23970-201ENSMUST00000083319 107 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Gm26111-201ENSMUST00000083969 106 ntBASIC3.23□□□□□ -1.89
Cbx4O55187 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cbx4O55187 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cbx4O55187 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cbx4O55187 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cbx4O55187 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cbx4O55187 Gm11577-201ENSMUST00000118030 737 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm12871-201ENSMUST00000118758 438 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.22□□□□□ -1.89
Cbx4O55187 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.22□□□□□ -1.89
Cbx4O55187 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.22□□□□□ -1.89
Cbx4O55187 Gm24552-201ENSMUST00000158646 103 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm9022-202ENSMUST00000183285 483 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm27608-201ENSMUST00000184822 162 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm37290-201ENSMUST00000195775 339 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.22□□□□□ -1.89
Cbx4O55187 Igkv13-64-201ENSMUST00000198143 343 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm17990-201ENSMUST00000211728 553 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm45778-201ENSMUST00000211959 153 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cbx4O55187 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.22□□□□□ -1.89
Cbx4O55187 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cbx4O55187 Mir21a-201ENSMUST00000083521 92 ntBASIC3.22□□□□□ -1.89
Cbx4O55187 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cbx4O55187 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cbx4O55187 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cbx4O55187 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
Cbx4O55187 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Cbx4O55187 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Cbx4O55187 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Cbx4O55187 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Cbx4O55187 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.21□□□□□ -1.9
Cbx4O55187 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Cbx4O55187 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Cbx4O55187 Gm22590-201ENSMUST00000104247 128 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm26423-201ENSMUST00000104277 128 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm22032-201ENSMUST00000116946 116 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm12191-201ENSMUST00000118307 348 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm9703-201ENSMUST00000119573 343 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm11384-201ENSMUST00000121376 303 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.21□□□□□ -1.9
Cbx4O55187 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm24168-201ENSMUST00000178825 107 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Mir6383-201ENSMUST00000184545 116 ntBASIC3.21□□□□□ -1.9
Cbx4O55187 Gm10105-201ENSMUST00000184601 270 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms