Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm23741-201ENSMUST00000097237 171 ntBASIC3.34□□□□□ -1.87
Smarce1O54941 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Smarce1O54941 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Smarce1O54941 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Smarce1O54941 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Smarce1O54941 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
Smarce1O54941 Gm22939-201ENSMUST00000103958 131 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm13614-201ENSMUST00000117306 503 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm8260-201ENSMUST00000119230 353 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm15760-201ENSMUST00000119553 283 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm13210-201ENSMUST00000121483 273 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm15065-201ENSMUST00000121699 273 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm11414-201ENSMUST00000121795 263 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm22755-201ENSMUST00000157143 100 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm26088-201ENSMUST00000157896 131 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm24901-201ENSMUST00000158125 110 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Smarce1O54941 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Mir8103-201ENSMUST00000183945 107 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.33□□□□□ -1.88
Smarce1O54941 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Smarce1O54941 Gm44657-201ENSMUST00000208568 450 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Smarce1O54941 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.33□□□□□ -1.88
Smarce1O54941 Gm7948-201ENSMUST00000212607 844 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.33□□□□□ -1.88
Smarce1O54941 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Gm22970-201ENSMUST00000083304 186 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.33□□□□□ -1.88
Smarce1O54941 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Smarce1O54941 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Smarce1O54941 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
Smarce1O54941 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm22957-201ENSMUST00000122511 123 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm22199-201ENSMUST00000122660 126 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm16533-201ENSMUST00000140035 228 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm25391-201ENSMUST00000157342 134 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Mir6907-201ENSMUST00000183764 71 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm27698-201ENSMUST00000184060 249 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.32□□□□□ -1.88
Smarce1O54941 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.32□□□□□ -1.88
Smarce1O54941 Gm21673-201ENSMUST00000186640 436 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm19641-201ENSMUST00000188432 417 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm21135-201ENSMUST00000189023 436 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.32□□□□□ -1.88
Smarce1O54941 Gm44594-201ENSMUST00000208982 407 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Gm19441-201ENSMUST00000221545 330 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 CT030662.1-201ENSMUST00000227380 232 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Smarce1O54941 Gm22061-201ENSMUST00000082557 107 ntBASIC3.32□□□□□ -1.88
Smarce1O54941 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Smarce1O54941 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Smarce1O54941 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Smarce1O54941 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Smarce1O54941 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Smarce1O54941 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm13803-201ENSMUST00000117547 489 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm15175-201ENSMUST00000117629 132 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm12042-201ENSMUST00000120479 301 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm11456-201ENSMUST00000121070 256 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm23886-201ENSMUST00000122684 313 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC3.31□□□□□ -1.88
Smarce1O54941 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.31□□□□□ -1.88
Smarce1O54941 Gm24443-201ENSMUST00000157242 132 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm26041-201ENSMUST00000158148 108 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Smarce1O54941 Gm44324-201ENSMUST00000198517 135 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.31□□□□□ -1.88
Smarce1O54941 Gm42164-201ENSMUST00000198881 379 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm45101-201ENSMUST00000208327 232 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Smarce1O54941 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Smarce1O54941 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Smarce1O54941 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Smarce1O54941 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Smarce1O54941 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Smarce1O54941 Gm22974-201ENSMUST00000083301 103 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Gm25859-201ENSMUST00000083710 91 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Snord38a-201ENSMUST00000083746 71 ntBASIC3.31□□□□□ -1.88
Smarce1O54941 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smarce1O54941 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm25466-201ENSMUST00000103995 132 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm25728-201ENSMUST00000104525 159 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm9009-201ENSMUST00000117321 326 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm12053-201ENSMUST00000119022 252 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm15077-201ENSMUST00000122344 362 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm13368-201ENSMUST00000122443 430 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.3□□□□□ -1.88
Smarce1O54941 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms