Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm13406-201ENSMUST00000121991 256 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm25666-201ENSMUST00000157702 107 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm17063-201ENSMUST00000168135 456 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm4540-201ENSMUST00000170669 429 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm25996-201ENSMUST00000175393 117 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm21885-201ENSMUST00000178891 327 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Mir6975-201ENSMUST00000184879 61 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm29603-201ENSMUST00000186792 334 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm29389-201ENSMUST00000191562 352 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm37778-201ENSMUST00000191732 190 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm38281-201ENSMUST00000192301 315 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm37000-201ENSMUST00000193058 428 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm45252-201ENSMUST00000211579 397 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Hmgb3O54879 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.53□□□□□ -2.16
Hmgb3O54879 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm46193-201ENSMUST00000219399 364 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm9318-201ENSMUST00000222444 438 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm23628-201ENSMUST00000082464 173 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm24406-201ENSMUST00000083026 128 ntBASIC1.53□□□□□ -2.16
Hmgb3O54879 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
Hmgb3O54879 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
Hmgb3O54879 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Hmgb3O54879 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Hmgb3O54879 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm18300-201ENSMUST00000192792 1406 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Mir3096-201ENSMUST00000116685 71 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm7164-201ENSMUST00000117503 450 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm12071-201ENSMUST00000121968 469 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm26256-201ENSMUST00000122499 186 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm15281-201ENSMUST00000125181 351 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm14333-201ENSMUST00000130484 264 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm25283-201ENSMUST00000157272 77 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm25066-201ENSMUST00000158145 123 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm26041-201ENSMUST00000158148 108 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Hmgb3O54879 Mir7k-201ENSMUST00000184115 110 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm28755-201ENSMUST00000185773 199 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm43286-201ENSMUST00000197420 424 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm8041-201ENSMUST00000199755 616 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Mir7215-201ENSMUST00000200383 51 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.52□□□□□ -2.17
Hmgb3O54879 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm7214-201ENSMUST00000222428 272 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 AC115291.1-201ENSMUST00000226803 258 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.52□□□□□ -2.17
Hmgb3O54879 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Hmgb3O54879 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm37143-201ENSMUST00000195180 3259 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm12897-201ENSMUST00000120341 250 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm11384-201ENSMUST00000121376 303 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Snrpert-201ENSMUST00000121967 279 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm12956-201ENSMUST00000122184 414 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm2930-201ENSMUST00000170403 474 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm24656-201ENSMUST00000177548 132 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm9892-201ENSMUST00000182415 992 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm28900-201ENSMUST00000185232 156 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm37002-201ENSMUST00000194560 373 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm44041-201ENSMUST00000203678 396 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm34701-202ENSMUST00000204685 360 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm45754-201ENSMUST00000212380 279 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.51□□□□□ -2.17
Hmgb3O54879 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC1.51□□□□□ -2.17
Hmgb3O54879 Mir222-201ENSMUST00000083537 79 ntBASIC1.51□□□□□ -2.17
Hmgb3O54879 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Hmgb3O54879 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Hmgb3O54879 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Hmgb3O54879 Gm44286-201ENSMUST00000204098 1487 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm45262-201ENSMUST00000209917 1463 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm12793-201ENSMUST00000119268 292 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm5646-201ENSMUST00000120568 714 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm15986-201ENSMUST00000122153 400 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm25961-201ENSMUST00000157174 135 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm26345-201ENSMUST00000157534 120 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms