Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Ccdc9bA3KGF9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Ccdc9bA3KGF9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc9bA3KGF9 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ccdc9bA3KGF9 Svet1-201ENSMUST00000209370 3940 ntBASIC4.21□□□□□ -1.73
Ccdc9bA3KGF9 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm12427-201ENSMUST00000117719 302 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm22958-201ENSMUST00000122512 184 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm24745-201ENSMUST00000157840 85 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm23196-201ENSMUST00000158806 107 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm21893-201ENSMUST00000179119 397 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Mir7022-201ENSMUST00000183749 61 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm43402-201ENSMUST00000197159 159 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm6240-201ENSMUST00000208014 473 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm45002-201ENSMUST00000208045 120 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm7093-201ENSMUST00000223004 581 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Mecom-201ENSMUST00000061088 348 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm25896-201ENSMUST00000083713 136 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm23731-201ENSMUST00000083749 107 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.21□□□□□ -1.74
Ccdc9bA3KGF9 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm6897-201ENSMUST00000117714 138 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm13567-201ENSMUST00000118026 247 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm15613-201ENSMUST00000118396 326 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm14758-201ENSMUST00000119104 138 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm22613-201ENSMUST00000122679 292 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm23219-201ENSMUST00000158123 87 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm25834-201ENSMUST00000158916 101 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm16326-201ENSMUST00000162843 414 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm24084-201ENSMUST00000175173 137 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Gm43424-201ENSMUST00000200484 253 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 AC154358.1-201ENSMUST00000224871 218 ntBASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ccdc9bA3KGF9 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm22784-201ENSMUST00000104088 132 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm6574-201ENSMUST00000120037 362 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm24594-201ENSMUST00000122502 99 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm25783-201ENSMUST00000122525 190 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm26028-201ENSMUST00000158660 294 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm38270-201ENSMUST00000192721 407 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm44485-201ENSMUST00000199569 137 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm44657-201ENSMUST00000208568 450 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm22247-201ENSMUST00000082476 131 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ccdc9bA3KGF9 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc9bA3KGF9 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ccdc9bA3KGF9 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms