Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm43007-201ENSMUST00000197618 291 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm19140-201ENSMUST00000209790 421 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm45387-201ENSMUST00000209792 632 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 AC115289.1-201ENSMUST00000224915 522 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 AC160930.1-201ENSMUST00000227194 337 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm25257-201ENSMUST00000083907 110 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm24049-201ENSMUST00000102409 100 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm14794-201ENSMUST00000118181 192 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm14588-201ENSMUST00000119895 172 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm12071-201ENSMUST00000121968 469 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm23600-201ENSMUST00000157260 71 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Mir1927-201ENSMUST00000158579 109 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm16232-201ENSMUST00000162856 167 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37557-201ENSMUST00000191640 139 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm43652-201ENSMUST00000196219 675 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm18748-201ENSMUST00000198507 622 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44472-201ENSMUST00000204922 943 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44961-201ENSMUST00000207450 196 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm45101-201ENSMUST00000208327 232 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm17911-201ENSMUST00000210806 877 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Mir465-201ENSMUST00000093563 74 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm23741-201ENSMUST00000097237 171 ntBASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Mir673-201ENSMUST00000102361 91 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm22496-201ENSMUST00000104493 88 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Mir466n-201ENSMUST00000104798 94 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm25294-201ENSMUST00000122791 104 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm24138-201ENSMUST00000157572 114 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm21744-201ENSMUST00000178403 662 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm25175-201ENSMUST00000178712 79 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm21171-201ENSMUST00000180048 673 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm27220-201ENSMUST00000183453 262 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm29413-201ENSMUST00000186019 880 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm28627-201ENSMUST00000186141 453 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm28700-201ENSMUST00000187614 579 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm29639-201ENSMUST00000188375 580 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm28843-201ENSMUST00000189198 678 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm29546-201ENSMUST00000191171 678 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm20915-201ENSMUST00000191575 663 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm36966-201ENSMUST00000192217 413 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm43722-201ENSMUST00000196054 124 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Mir7232-201ENSMUST00000197929 74 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 AC113305.1-201ENSMUST00000214664 724 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 AC168266.1-201ENSMUST00000216024 226 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 AC125223.1-203ENSMUST00000225304 498 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr197-201ENSMUST00000080031 926 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm24044-201ENSMUST00000083107 156 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm25007-201ENSMUST00000083808 133 ntBASIC1.74□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms