Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm43582-201ENSMUST00000196149 343 ntBASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 AC158142.2-201ENSMUST00000227892 635 ntBASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Olfr197-201ENSMUST00000080031 926 ntBASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Gm24805-201ENSMUST00000082931 104 ntBASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trav3-4A0A075B654 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Mir673-201ENSMUST00000102361 91 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm23803-201ENSMUST00000104610 132 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm6071-201ENSMUST00000119561 440 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm15103-201ENSMUST00000119893 871 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm14821-201ENSMUST00000121975 435 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm17038-201ENSMUST00000166586 494 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm42924-201ENSMUST00000197261 185 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm43217-201ENSMUST00000199513 367 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm44182-201ENSMUST00000204052 115 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Gm5374-201ENSMUST00000222868 657 ntBASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trav3-4A0A075B654 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm26247-201ENSMUST00000116702 91 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm22194-201ENSMUST00000116869 95 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm12393-201ENSMUST00000117084 848 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm15223-201ENSMUST00000120989 826 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm24716-201ENSMUST00000157524 104 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm22082-201ENSMUST00000157587 161 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm22159-201ENSMUST00000158412 130 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm16162-201ENSMUST00000162296 297 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm17072-201ENSMUST00000166673 658 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm22862-201ENSMUST00000178593 121 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm21816-201ENSMUST00000179255 360 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm28755-201ENSMUST00000185773 199 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm43979-201ENSMUST00000203179 475 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm23939-201ENSMUST00000082880 133 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm10360-201ENSMUST00000097219 272 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.2□□□□□ -2.22
Trav3-4A0A075B654 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm14677-201ENSMUST00000117866 486 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm12926-201ENSMUST00000121158 409 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm22789-201ENSMUST00000157884 130 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm22382-201ENSMUST00000158185 130 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm24553-201ENSMUST00000158653 131 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm26157-201ENSMUST00000158974 126 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Mir7667-201ENSMUST00000183866 63 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Trbv27-201ENSMUST00000193711 277 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm17893-201ENSMUST00000203017 770 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm44919-201ENSMUST00000208587 1073 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 AL929285.1-201ENSMUST00000215522 229 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm2446-201ENSMUST00000220144 772 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Trav3-4A0A075B654 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Gm11359-201ENSMUST00000120039 567 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Gm22559-201ENSMUST00000157329 134 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Gm26345-201ENSMUST00000157534 120 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Snord13-201ENSMUST00000157627 104 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Gm23181-201ENSMUST00000158685 110 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Gm23473-201ENSMUST00000158883 116 ntBASIC1.18□□□□□ -2.22
Trav3-4A0A075B654 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms