Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm25859-201ENSMUST00000083710 91 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Snord38a-201ENSMUST00000083746 71 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 n-R5s219-201ENSMUST00000104328 132 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm11221-201ENSMUST00000117230 597 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm12053-201ENSMUST00000119022 252 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm5958-201ENSMUST00000147698 297 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm22141-201ENSMUST00000157403 277 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm23053-201ENSMUST00000175136 96 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm24082-201ENSMUST00000175175 83 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Mir6341-201ENSMUST00000183490 121 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm27317-201ENSMUST00000183533 95 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm27527-201ENSMUST00000183903 99 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm29184-201ENSMUST00000190038 334 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm42164-201ENSMUST00000198881 379 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm44903-201ENSMUST00000206840 130 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm6842-201ENSMUST00000211361 390 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm6030-201ENSMUST00000078768 402 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm23741-201ENSMUST00000097237 171 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Trav1A0A075B5Z4 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm24096-201ENSMUST00000103905 110 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm12803-201ENSMUST00000118907 821 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm12787-201ENSMUST00000119234 396 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm6071-201ENSMUST00000119561 440 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm14881-201ENSMUST00000120366 372 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm11522-201ENSMUST00000120533 176 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm8880-201ENSMUST00000121800 454 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm6568-201ENSMUST00000122274 697 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm22452-201ENSMUST00000122804 104 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm26195-201ENSMUST00000175035 101 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm27660-201ENSMUST00000184028 208 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm21673-201ENSMUST00000186640 436 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm21135-201ENSMUST00000189023 436 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm8041-201ENSMUST00000199755 616 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm44011-201ENSMUST00000203336 394 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm44425-201ENSMUST00000203739 429 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm18346-201ENSMUST00000216782 325 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm16419-201ENSMUST00000221057 625 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm23650-201ENSMUST00000083355 70 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Trav1A0A075B5Z4 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm14918-201ENSMUST00000118153 268 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm8260-201ENSMUST00000119230 353 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm14906-201ENSMUST00000119265 390 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm11582-201ENSMUST00000121041 236 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm25621-201ENSMUST00000157223 114 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm26101-201ENSMUST00000157246 105 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm23716-201ENSMUST00000157348 144 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm23865-201ENSMUST00000157723 97 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm20450-201ENSMUST00000173652 147 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Mir8103-201ENSMUST00000183945 107 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Mir6383-201ENSMUST00000184545 116 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm28358-202ENSMUST00000189292 223 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm44961-201ENSMUST00000207450 196 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Gm45105-201ENSMUST00000207824 397 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.49□□□□□ -2.01
Trav1A0A075B5Z4 AC140785.1-201ENSMUST00000217782 383 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms