Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm24121-201ENSMUST00000102029 106 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm22498-201ENSMUST00000104497 86 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm15263-201ENSMUST00000121556 642 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm23171-201ENSMUST00000157159 264 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm25278-201ENSMUST00000157267 120 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm26373-201ENSMUST00000157833 103 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm22312-201ENSMUST00000158005 130 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm21893-201ENSMUST00000179119 397 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm28453-203ENSMUST00000187041 189 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm43304-201ENSMUST00000196803 326 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm19096-201ENSMUST00000209705 766 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm29774-201ENSMUST00000219270 436 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm23517-201ENSMUST00000082830 192 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm23731-201ENSMUST00000083749 107 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm22826-201ENSMUST00000083774 165 ntBASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Prpf40aQ9R1C7 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm14304-201ENSMUST00000117272 446 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm12062-201ENSMUST00000117533 259 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm14714-201ENSMUST00000119743 439 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm2182-201ENSMUST00000145243 663 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm24113-201ENSMUST00000157477 276 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm22766-201ENSMUST00000158372 99 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm16326-201ENSMUST00000162843 414 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm45002-201ENSMUST00000208045 120 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.97□□□□□ -1.61
Prpf40aQ9R1C7 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
Prpf40aQ9R1C7 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Prpf40aQ9R1C7 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Prpf40aQ9R1C7 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
Prpf40aQ9R1C7 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.96□□□□□ -1.61
Prpf40aQ9R1C7 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.96□□□□□ -1.61
Prpf40aQ9R1C7 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm6897-201ENSMUST00000117714 138 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm14758-201ENSMUST00000119104 138 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm23496-201ENSMUST00000157741 248 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm23196-201ENSMUST00000158806 107 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm24084-201ENSMUST00000175173 137 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm21850-201ENSMUST00000179792 359 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm27540-201ENSMUST00000184950 187 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm2950-201ENSMUST00000185530 520 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm37417-201ENSMUST00000195257 454 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm43402-201ENSMUST00000197159 159 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Prpf40aQ9R1C7 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Prpf40aQ9R1C7 Gm22784-201ENSMUST00000104088 132 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms