Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm22839-201ENSMUST00000158436 304 ntBASIC1.63□□□□□ -2.15
Scn11aQ9R053 Gm17538-201ENSMUST00000168236 327 ntBASIC1.63□□□□□ -2.15
Scn11aQ9R053 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.63□□□□□ -2.15
Scn11aQ9R053 Gm45789-201ENSMUST00000213038 364 ntBASIC1.63□□□□□ -2.15
Scn11aQ9R053 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.63□□□□□ -2.15
Scn11aQ9R053 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
Scn11aQ9R053 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.63□□□□□ -2.15
Scn11aQ9R053 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC1.62□□□□□ -2.15
Scn11aQ9R053 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Scn11aQ9R053 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm18892-201ENSMUST00000217628 881 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm24715-201ENSMUST00000102377 95 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm22766-201ENSMUST00000158372 99 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.62□□□□□ -2.15
Scn11aQ9R053 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.62□□□□□ -2.15
Scn11aQ9R053 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Scn11aQ9R053 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Scn11aQ9R053 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.61□□□□□ -2.15
Scn11aQ9R053 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Scn11aQ9R053 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Scn11aQ9R053 Gm38217-201ENSMUST00000194358 910 ntBASIC1.61□□□□□ -2.15
Scn11aQ9R053 Gm44634-201ENSMUST00000206119 152 ntBASIC1.61□□□□□ -2.15
Scn11aQ9R053 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.61□□□□□ -2.15
Scn11aQ9R053 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.61□□□□□ -2.15
Scn11aQ9R053 AC131100.2-201ENSMUST00000227701 998 ntBASIC1.61□□□□□ -2.15
Scn11aQ9R053 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.6□□□□□ -2.15
Scn11aQ9R053 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Scn11aQ9R053 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.6□□□□□ -2.15
Scn11aQ9R053 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Scn11aQ9R053 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm25321-201ENSMUST00000122558 102 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm23469-201ENSMUST00000157131 104 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm22963-201ENSMUST00000157960 91 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm24561-201ENSMUST00000175182 95 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm11395-201ENSMUST00000181011 499 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Mir6541-201ENSMUST00000183649 110 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Scn11aQ9R053 AC153936.1-201ENSMUST00000219874 395 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm25080-201ENSMUST00000082526 107 ntBASIC1.59□□□□□ -2.15
Scn11aQ9R053 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.59□□□□□ -2.15
Scn11aQ9R053 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.59□□□□□ -2.15
Scn11aQ9R053 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Scn11aQ9R053 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
Scn11aQ9R053 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC1.59□□□□□ -2.16
Scn11aQ9R053 Gm27520-201ENSMUST00000184872 81 ntBASIC1.59□□□□□ -2.16
Scn11aQ9R053 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.58□□□□□ -2.16
Scn11aQ9R053 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm14867-201ENSMUST00000120156 866 ntBASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm25150-201ENSMUST00000157121 60 ntBASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm25768-201ENSMUST00000158570 98 ntBASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm25715-201ENSMUST00000158627 125 ntBASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm23190-201ENSMUST00000180307 64 ntBASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.58□□□□□ -2.16
Scn11aQ9R053 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.58□□□□□ -2.16
Scn11aQ9R053 Gm23126-201ENSMUST00000104260 134 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm13331-201ENSMUST00000117500 448 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm14770-201ENSMUST00000122197 312 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm26278-201ENSMUST00000157098 132 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Scn11aQ9R053 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm37993-201ENSMUST00000195301 988 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm44818-201ENSMUST00000206608 358 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Scn11aQ9R053 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm25506-201ENSMUST00000104339 70 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm14709-201ENSMUST00000121225 304 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm13440-201ENSMUST00000121665 496 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm14366-201ENSMUST00000121970 730 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC1.57□□□□□ -2.16
Scn11aQ9R053 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm24151-201ENSMUST00000082758 141 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Gm25409-201ENSMUST00000083764 131 ntBASIC1.57□□□□□ -2.16
Scn11aQ9R053 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Scn11aQ9R053 Gm43216-201ENSMUST00000196295 1333 ntBASIC1.56□□□□□ -2.16
Scn11aQ9R053 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Scn11aQ9R053 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Scn11aQ9R053 Gm17113-201ENSMUST00000170118 171 ntBASIC1.56□□□□□ -2.16
Scn11aQ9R053 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.56□□□□□ -2.16
Scn11aQ9R053 Gm18991-201ENSMUST00000209225 746 ntBASIC1.56□□□□□ -2.16
Scn11aQ9R053 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.56□□□□□ -2.16
Scn11aQ9R053 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.56□□□□□ -2.16
Scn11aQ9R053 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.56□□□□□ -2.16
Scn11aQ9R053 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC1.55□□□□□ -2.16
Scn11aQ9R053 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.55□□□□□ -2.16
Scn11aQ9R053 Gm25341-201ENSMUST00000157461 268 ntBASIC1.55□□□□□ -2.16
Scn11aQ9R053 Gm22340-201ENSMUST00000157717 114 ntBASIC1.55□□□□□ -2.16
Scn11aQ9R053 Gm37557-201ENSMUST00000191640 139 ntBASIC1.55□□□□□ -2.16
Scn11aQ9R053 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.55□□□□□ -2.16
Scn11aQ9R053 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 160.1 ms