Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 CT009764.1-201ENSMUST00000222260 483 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm18338-201ENSMUST00000222381 560 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm18026-201ENSMUST00000222789 727 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 AC161758.1-201ENSMUST00000226123 310 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm25126-201ENSMUST00000083343 102 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm25124-201ENSMUST00000083345 164 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm36944-201ENSMUST00000192257 2759 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm25961-201ENSMUST00000157174 135 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm38281-201ENSMUST00000192301 315 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm44212-201ENSMUST00000205016 897 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.54□□□□□ -2.16
Trem3Q9JKE1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm24907-201ENSMUST00000116932 128 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm12878-201ENSMUST00000118744 332 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm15497-201ENSMUST00000119137 551 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm14709-201ENSMUST00000121225 304 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm13406-201ENSMUST00000121991 256 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm25113-201ENSMUST00000157185 143 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm25051-201ENSMUST00000158602 249 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm9071-201ENSMUST00000165915 474 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm22111-201ENSMUST00000178010 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm23687-201ENSMUST00000178664 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm24566-201ENSMUST00000179286 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm23305-201ENSMUST00000179342 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm26389-201ENSMUST00000179819 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm22130-201ENSMUST00000179979 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm22393-201ENSMUST00000180153 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm25085-201ENSMUST00000180298 79 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm18964-201ENSMUST00000193013 563 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm43582-201ENSMUST00000196149 343 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm44477-201ENSMUST00000199661 110 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm44041-201ENSMUST00000203678 396 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm18410-201ENSMUST00000207199 577 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm26206-201ENSMUST00000082908 110 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Gm23058-201ENSMUST00000093703 107 ntBASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
Trem3Q9JKE1 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm649-201ENSMUST00000117284 1054 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm25666-201ENSMUST00000157702 107 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm29263-201ENSMUST00000188718 463 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm28384-201ENSMUST00000189079 463 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm43978-201ENSMUST00000203491 451 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm44634-201ENSMUST00000206119 152 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm18000-201ENSMUST00000212153 800 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.52□□□□□ -2.17
Trem3Q9JKE1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trem3Q9JKE1 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm25094-201ENSMUST00000103992 131 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm23175-201ENSMUST00000104371 132 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm11490-201ENSMUST00000118128 272 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm5646-201ENSMUST00000120568 714 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm16328-201ENSMUST00000126985 196 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm27443-201ENSMUST00000184660 98 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm29389-201ENSMUST00000191562 352 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm7299-201ENSMUST00000194441 581 ntBASIC1.51□□□□□ -2.17
Trem3Q9JKE1 Gm7871-201ENSMUST00000195346 618 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms