Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm24204-201ENSMUST00000082950 107 ntBASIC5.33□□□□□ -1.56
Ube3bQ9ES34 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Ube3bQ9ES34 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ube3bQ9ES34 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ube3bQ9ES34 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.33□□□□□ -1.56
Ube3bQ9ES34 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm15282-201ENSMUST00000117707 300 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm13232-201ENSMUST00000121816 632 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm16250-201ENSMUST00000148974 256 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm25393-201ENSMUST00000157336 285 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm25913-201ENSMUST00000157617 135 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Mir1966-201ENSMUST00000158807 108 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm24224-201ENSMUST00000158828 258 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm22367-201ENSMUST00000178930 132 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm27611-201ENSMUST00000184690 108 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm8508-201ENSMUST00000061226 363 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Mir384-201ENSMUST00000083565 88 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm23875-201ENSMUST00000083711 318 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 AC165106.3-201ENSMUST00000228191 3843 ntBASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ube3bQ9ES34 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm26367-201ENSMUST00000104165 132 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm25726-201ENSMUST00000104529 129 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm22395-201ENSMUST00000177427 96 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm27457-201ENSMUST00000184771 156 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 CT030247.1-201ENSMUST00000216810 267 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm8942-201ENSMUST00000217892 400 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Gm17976-201ENSMUST00000184037 1909 ntBASIC5.31□□□□□ -1.56
Ube3bQ9ES34 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ube3bQ9ES34 AC153964.1-201ENSMUST00000219677 3142 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm24172-201ENSMUST00000104127 117 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm29574-201ENSMUST00000186226 696 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm44320-201ENSMUST00000199276 86 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm19244-201ENSMUST00000204340 253 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm22294-201ENSMUST00000083308 104 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm23650-201ENSMUST00000083355 70 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.3□□□□□ -1.56
Ube3bQ9ES34 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Mir761-201ENSMUST00000103245 76 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm7308-201ENSMUST00000121087 447 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm23184-201ENSMUST00000122594 131 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm10444-201ENSMUST00000126708 148 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm10059-201ENSMUST00000131139 171 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm24441-201ENSMUST00000157235 281 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm24213-201ENSMUST00000158255 258 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm37050-201ENSMUST00000193464 466 ntBASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC5.29□□□□□ -1.56
Ube3bQ9ES34 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms