Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Mir452-201ENSMUST00000093629 85 ntBASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Trim54Q9ERP3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
Trim54Q9ERP3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Mir8106-201ENSMUST00000184520 139 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm45513-201ENSMUST00000210228 376 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm45273-201ENSMUST00000211559 281 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 AL603630.1-201ENSMUST00000214781 147 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm16419-201ENSMUST00000221057 625 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm23242-201ENSMUST00000083055 107 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm25411-201ENSMUST00000083760 151 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm381-201ENSMUST00000117443 2037 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Trim54Q9ERP3 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.52□□□□□ -1.85
Trim54Q9ERP3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm14119-201ENSMUST00000119511 235 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm11229-201ENSMUST00000121993 437 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm16411-201ENSMUST00000122164 1100 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm8207-201ENSMUST00000171204 502 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm23053-201ENSMUST00000175136 96 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm20672-201ENSMUST00000176605 261 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm25198-201ENSMUST00000178574 110 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm27490-201ENSMUST00000184754 128 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm28358-202ENSMUST00000189292 223 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm37353-201ENSMUST00000194497 313 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm5001-201ENSMUST00000204361 331 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Gm26446-201ENSMUST00000082455 103 ntBASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Trim54Q9ERP3 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm12787-201ENSMUST00000119234 396 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm13443-201ENSMUST00000120770 555 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm14775-201ENSMUST00000122089 310 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm20450-201ENSMUST00000173652 147 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Mir5127-201ENSMUST00000175295 71 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm18588-201ENSMUST00000177308 492 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm27893-201ENSMUST00000184408 194 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm32447-201ENSMUST00000194265 697 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm9379-201ENSMUST00000196790 646 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm44393-201ENSMUST00000197418 138 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Gm5034-201ENSMUST00000199115 634 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.5□□□□□ -1.85
Trim54Q9ERP3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm25539-201ENSMUST00000116886 122 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm12858-201ENSMUST00000121913 208 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm12819-201ENSMUST00000122223 629 ntBASIC3.49□□□□□ -1.85
Trim54Q9ERP3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms