Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm24153-201ENSMUST00000179280 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25597-201ENSMUST00000179388 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25816-201ENSMUST00000179764 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26188-201ENSMUST00000179963 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26433-201ENSMUST00000180227 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm22128-201ENSMUST00000180346 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Mir6411-201ENSMUST00000183556 108 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm45530-201ENSMUST00000211658 225 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm45772-201ENSMUST00000212961 240 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm2544-201ENSMUST00000222702 756 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25403-201ENSMUST00000082971 143 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm22151-201ENSMUST00000116963 58 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm15029-201ENSMUST00000119742 199 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm12071-201ENSMUST00000121968 469 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm25339-201ENSMUST00000157458 232 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Mir5129-201ENSMUST00000174938 78 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm22131-201ENSMUST00000178415 94 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Mir7081-201ENSMUST00000184490 75 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm18341-201ENSMUST00000197538 622 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm29920-201ENSMUST00000206876 754 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Lima1Q9ERG0 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm22575-201ENSMUST00000082981 110 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Mir30d-201ENSMUST00000083503 82 ntBASIC2.07□□□□□ -2.08
Lima1Q9ERG0 Gm22674-201ENSMUST00000104413 131 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm2348-201ENSMUST00000108782 300 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm7429-201ENSMUST00000118664 348 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm14669-201ENSMUST00000118841 250 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm14848-201ENSMUST00000121850 467 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm22483-201ENSMUST00000157986 274 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm17072-201ENSMUST00000166673 658 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm29641-201ENSMUST00000188955 259 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm43228-201ENSMUST00000200735 264 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm31520-201ENSMUST00000203048 733 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm44041-201ENSMUST00000203678 396 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm45438-201ENSMUST00000210242 564 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm31849-201ENSMUST00000220306 375 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Lima1Q9ERG0 Gm13454-201ENSMUST00000118166 483 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm26275-201ENSMUST00000157101 268 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm23469-201ENSMUST00000157131 104 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm26105-201ENSMUST00000157253 190 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm20656-201ENSMUST00000176925 518 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Mir497-201ENSMUST00000200557 84 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm43979-201ENSMUST00000203179 475 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm44548-201ENSMUST00000208929 192 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm10038-201ENSMUST00000077233 441 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm23247-201ENSMUST00000083373 107 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Gm22353-201ENSMUST00000083918 136 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Lima1Q9ERG0 Mir1195-201ENSMUST00000116818 98 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm12934-201ENSMUST00000119221 343 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.04□□□□□ -2.08
Lima1Q9ERG0 Gm14815-201ENSMUST00000120060 488 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms