Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Mir599-201ENSMUST00000102378 88 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm14931-201ENSMUST00000111079 253 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm12640-201ENSMUST00000120097 310 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm23754-201ENSMUST00000157576 63 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm43911-201ENSMUST00000203097 76 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm18410-201ENSMUST00000207199 577 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm45742-201ENSMUST00000212400 433 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm25213-201ENSMUST00000102388 113 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm2318-201ENSMUST00000119623 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm6587-201ENSMUST00000120219 613 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm15037-201ENSMUST00000120358 259 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm12383-201ENSMUST00000120628 760 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm2768-201ENSMUST00000121062 250 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm15147-201ENSMUST00000122263 483 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm17038-201ENSMUST00000166586 494 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7438-201ENSMUST00000177664 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7408-201ENSMUST00000178014 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7386-201ENSMUST00000178020 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm3657-201ENSMUST00000178170 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7415-201ENSMUST00000178205 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7398-201ENSMUST00000178589 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7391-201ENSMUST00000178680 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm7375-201ENSMUST00000179232 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm3681-201ENSMUST00000179940 639 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm27271-201ENSMUST00000183509 170 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Mir8103-201ENSMUST00000183945 107 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm43043-201ENSMUST00000196579 412 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Scn4aQ9ER60 AC152159.1-201ENSMUST00000226719 2769 ntBASIC2.9□□□□□ -1.95
Scn4aQ9ER60 Gm11268-201ENSMUST00000118347 267 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm7429-201ENSMUST00000118664 348 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm25888-201ENSMUST00000157778 302 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Mir5136-201ENSMUST00000175573 76 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm5900-201ENSMUST00000179862 375 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm19257-201ENSMUST00000186121 183 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm37290-201ENSMUST00000195775 339 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm43669-201ENSMUST00000198229 436 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm45614-201ENSMUST00000209994 721 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm46146-201ENSMUST00000217483 346 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.89□□□□□ -1.95
Scn4aQ9ER60 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm27428-201ENSMUST00000184289 110 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Mir6383-201ENSMUST00000184545 116 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Gm43954-201ENSMUST00000204634 544 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Scn4aQ9ER60 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm12782-201ENSMUST00000117519 727 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm6664-201ENSMUST00000119138 468 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm15760-201ENSMUST00000119553 283 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm2005-201ENSMUST00000120759 542 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm27330-201ENSMUST00000184689 132 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm45063-201ENSMUST00000203726 472 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm45439-201ENSMUST00000211723 359 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm25131-201ENSMUST00000082653 151 ntBASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Scn4aQ9ER60 Gm26301-201ENSMUST00000104813 95 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Mir467h-201ENSMUST00000116759 121 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm14238-201ENSMUST00000120227 323 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm12706-201ENSMUST00000121588 698 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Snrpert-201ENSMUST00000121967 279 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm44533-201ENSMUST00000207782 268 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 AL929265.1-201ENSMUST00000213427 125 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.87□□□□□ -1.95
Scn4aQ9ER60 Gm14566-201ENSMUST00000118915 321 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm13239-201ENSMUST00000119920 637 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm5958-201ENSMUST00000147698 297 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm23600-201ENSMUST00000157260 71 ntBASIC2.86□□□□□ -1.95
Scn4aQ9ER60 Gm22225-201ENSMUST00000157358 278 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms