Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Mir196b-201ENSMUST00000083509 85 ntBASIC1.76□□□□□ -2.13
Cpsf1Q9EPU4 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.76□□□□□ -2.13
Cpsf1Q9EPU4 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.76□□□□□ -2.13
Cpsf1Q9EPU4 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Gm12309-201ENSMUST00000119889 182 ntBASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Mir5099-201ENSMUST00000175257 74 ntBASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Gm43848-201ENSMUST00000198060 1247 ntBASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Gm44348-201ENSMUST00000200165 122 ntBASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cpsf1Q9EPU4 Mir873a-201ENSMUST00000104863 77 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm23340-201ENSMUST00000158955 123 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm15143-201ENSMUST00000178180 714 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm37987-201ENSMUST00000194999 825 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm37817-201ENSMUST00000195276 434 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm22658-201ENSMUST00000104196 155 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm11854-201ENSMUST00000117839 446 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm14238-201ENSMUST00000120227 323 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm44476-201ENSMUST00000196225 91 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm42834-201ENSMUST00000196845 256 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 AC151907.1-201ENSMUST00000228812 412 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm24319-201ENSMUST00000083389 107 ntBASIC1.74□□□□□ -2.13
Cpsf1Q9EPU4 Gm19641-201ENSMUST00000188432 417 ntBASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Gm43510-201ENSMUST00000197922 353 ntBASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Gm45273-201ENSMUST00000211559 281 ntBASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Cpsf1Q9EPU4 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Gm24878-201ENSMUST00000158782 104 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Gm17538-201ENSMUST00000168236 327 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Gm27271-201ENSMUST00000183509 170 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Gm27245-201ENSMUST00000184385 376 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Gm43675-201ENSMUST00000199468 1184 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 AC173481.1-201ENSMUST00000223351 270 ntBASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.72□□□□□ -2.13
Cpsf1Q9EPU4 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
Cpsf1Q9EPU4 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Gm11843-201ENSMUST00000118984 425 ntBASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Gm14770-201ENSMUST00000122197 312 ntBASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Mir6371-201ENSMUST00000184470 111 ntBASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Gm44666-201ENSMUST00000208544 391 ntBASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Gm19599-201ENSMUST00000218898 358 ntBASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cpsf1Q9EPU4 Snord71-201ENSMUST00000104361 85 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Gm24863-201ENSMUST00000179499 107 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Mir344-201ENSMUST00000083634 95 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Cpsf1Q9EPU4 Gm649-201ENSMUST00000117284 1054 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Gm45791-201ENSMUST00000212908 352 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Gm23347-201ENSMUST00000083823 82 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.69□□□□□ -2.14
Cpsf1Q9EPU4 Gm12550-201ENSMUST00000118478 329 ntBASIC1.68□□□□□ -2.14
Cpsf1Q9EPU4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.68□□□□□ -2.14
Cpsf1Q9EPU4 Gm27044-201ENSMUST00000183033 796 ntBASIC1.68□□□□□ -2.14
Cpsf1Q9EPU4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.68□□□□□ -2.14
Cpsf1Q9EPU4 CT573422.1-201ENSMUST00000216655 405 ntBASIC1.68□□□□□ -2.14
Cpsf1Q9EPU4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cpsf1Q9EPU4 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 117.7 ms