Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Snora36b-201ENSMUST00000104383 132 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm24274-201ENSMUST00000116787 124 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm11384-201ENSMUST00000121376 303 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm14694-201ENSMUST00000121856 282 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm25979-201ENSMUST00000157177 138 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm25637-201ENSMUST00000157529 107 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm24436-201ENSMUST00000157889 302 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm17162-201ENSMUST00000168538 473 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Mir6363-201ENSMUST00000184880 114 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm17946-201ENSMUST00000186856 538 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm44295-201ENSMUST00000203805 437 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm6796-201ENSMUST00000211919 243 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm5374-201ENSMUST00000222868 657 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cdc40Q9DC48 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm6954-201ENSMUST00000117416 225 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm6664-201ENSMUST00000119138 468 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm15113-201ENSMUST00000119280 836 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm2830-201ENSMUST00000140330 385 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm25283-201ENSMUST00000157272 77 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm23223-201ENSMUST00000158119 127 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm29516-201ENSMUST00000190402 468 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm38213-201ENSMUST00000193203 173 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm18341-201ENSMUST00000197538 622 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm35570-201ENSMUST00000198730 681 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm29754-201ENSMUST00000206269 358 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Gm2446-201ENSMUST00000220144 772 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Mir127-201ENSMUST00000093568 70 ntBASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cdc40Q9DC48 Mir883a-201ENSMUST00000104824 76 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm12513-201ENSMUST00000118617 352 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm15106-201ENSMUST00000119691 821 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm15452-201ENSMUST00000119877 240 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm23600-201ENSMUST00000157260 71 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm25866-201ENSMUST00000158245 112 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm22131-201ENSMUST00000178415 94 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm17929-201ENSMUST00000186851 627 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm28169-201ENSMUST00000190342 345 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm38311-201ENSMUST00000192945 165 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm45522-201ENSMUST00000210784 166 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.28□□□□□ -2.04
Cdc40Q9DC48 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm5287-201ENSMUST00000120666 598 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm22664-201ENSMUST00000158719 105 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm16584-201ENSMUST00000159267 189 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm26195-201ENSMUST00000175035 101 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm25642-201ENSMUST00000175137 66 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Mir5118-201ENSMUST00000175551 67 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm27220-201ENSMUST00000183453 262 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm27369-201ENSMUST00000185182 71 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm28956-201ENSMUST00000189047 427 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm37037-201ENSMUST00000194475 424 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Mir7118-201ENSMUST00000197760 61 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm5317-201ENSMUST00000204445 847 ntBASIC2.27□□□□□ -2.05
Cdc40Q9DC48 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms