Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm24010-201ENSMUST00000157731 282 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm15900-201ENSMUST00000161584 342 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm6788-201ENSMUST00000166459 270 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm17183-201ENSMUST00000171170 493 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm37005-201ENSMUST00000193281 1164 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm19147-201ENSMUST00000199622 652 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Gm5471-201ENSMUST00000072732 337 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Mir137-201ENSMUST00000083635 73 ntBASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc3Q9D6Y1 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Ccdc3Q9D6Y1 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.09□□□□□ -2.08
Ccdc3Q9D6Y1 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Ccdc3Q9D6Y1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm25377-201ENSMUST00000104334 129 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm26101-201ENSMUST00000157246 105 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm7329-201ENSMUST00000185915 210 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm43901-201ENSMUST00000203247 453 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm46146-201ENSMUST00000217483 346 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Ccdc3Q9D6Y1 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Trav20-201ENSMUST00000142754 347 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm24601-201ENSMUST00000157970 143 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm24858-201ENSMUST00000158058 323 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm22093-201ENSMUST00000158980 111 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm5224-201ENSMUST00000183060 350 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm37684-201ENSMUST00000192779 355 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm44585-201ENSMUST00000207150 607 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Gm26128-201ENSMUST00000083170 110 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.07□□□□□ -2.08
Ccdc3Q9D6Y1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm14918-201ENSMUST00000118153 268 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm14669-201ENSMUST00000118841 250 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm13239-201ENSMUST00000119920 637 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Mir5129-201ENSMUST00000174938 78 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Mir6411-201ENSMUST00000183556 108 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm27991-201ENSMUST00000184804 137 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm17929-201ENSMUST00000186851 627 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm17946-201ENSMUST00000186856 538 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm42924-201ENSMUST00000197261 185 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Gm23377-201ENSMUST00000082943 126 ntBASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ccdc3Q9D6Y1 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm23010-201ENSMUST00000104151 126 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm7974-201ENSMUST00000117154 408 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm14915-201ENSMUST00000120747 204 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm25321-201ENSMUST00000122558 102 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm14651-201ENSMUST00000147192 442 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm24086-201ENSMUST00000175171 98 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm37037-201ENSMUST00000194475 424 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm43228-201ENSMUST00000200735 264 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 Gm45438-201ENSMUST00000210242 564 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.05□□□□□ -2.08
Ccdc3Q9D6Y1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms