Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm24671-201ENSMUST00000104159 158 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm22023-201ENSMUST00000104354 130 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm2066-201ENSMUST00000118046 389 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm14765-201ENSMUST00000121954 326 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm23716-201ENSMUST00000157348 144 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm3470-201ENSMUST00000160819 420 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm22166-201ENSMUST00000178419 121 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm23288-201ENSMUST00000179213 121 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm27783-201ENSMUST00000183534 105 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm28404-201ENSMUST00000190242 453 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm18775-201ENSMUST00000190763 586 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm37771-201ENSMUST00000193121 265 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm7871-201ENSMUST00000195346 618 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm37029-201ENSMUST00000195773 239 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm43217-201ENSMUST00000199513 367 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm25203-202ENSMUST00000200458 216 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm44818-201ENSMUST00000206608 358 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm19326-201ENSMUST00000219818 326 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm25203-201ENSMUST00000082842 215 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Vps28Q9D1C8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm25507-201ENSMUST00000116981 144 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm14987-201ENSMUST00000117820 676 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm14293-201ENSMUST00000118528 577 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm14069-201ENSMUST00000120815 229 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm25220-201ENSMUST00000157546 95 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm24438-201ENSMUST00000157893 115 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Mir8096-201ENSMUST00000184526 127 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm8392-201ENSMUST00000185647 835 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm19202-201ENSMUST00000198096 808 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm23723-201ENSMUST00000082996 132 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm26108-201ENSMUST00000083973 191 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.2□□□□□ -1.9
Vps28Q9D1C8 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm26147-201ENSMUST00000104479 114 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm14766-201ENSMUST00000121689 367 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm22563-201ENSMUST00000157333 269 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm22839-201ENSMUST00000158436 304 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm23144-201ENSMUST00000180226 107 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm26991-201ENSMUST00000180950 620 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm28390-201ENSMUST00000185212 700 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm29602-201ENSMUST00000186887 442 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm29429-201ENSMUST00000187071 121 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm28779-201ENSMUST00000189678 323 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm19193-201ENSMUST00000190263 590 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm37869-201ENSMUST00000193385 595 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm32447-201ENSMUST00000194265 697 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm44476-201ENSMUST00000196225 91 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.19□□□□□ -1.9
Vps28Q9D1C8 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.19□□□□□ -1.9
Vps28Q9D1C8 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms