Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm27189-201ENSMUST00000184119 190 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm28141-201ENSMUST00000186676 342 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm28628-201ENSMUST00000187006 264 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm37343-201ENSMUST00000192542 111 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm45687-201ENSMUST00000209454 155 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm35857-201ENSMUST00000212739 178 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm19563-201ENSMUST00000222031 270 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm26056-201ENSMUST00000083043 104 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm14987-201ENSMUST00000117820 676 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm25434-201ENSMUST00000158278 167 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm26362-201ENSMUST00000158865 315 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm22131-201ENSMUST00000178415 94 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Mir6933-201ENSMUST00000184982 81 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm29408-201ENSMUST00000187536 216 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm42925-201ENSMUST00000197359 285 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 AC116589.4-201ENSMUST00000222390 216 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.86□□□□□ -1.79
Ddx56Q9D0R4 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm22779-201ENSMUST00000104085 107 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm13876-201ENSMUST00000118451 261 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm23000-201ENSMUST00000157083 139 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm25335-201ENSMUST00000158043 103 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm22836-201ENSMUST00000158441 61 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm20399-201ENSMUST00000174652 132 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm27624-201ENSMUST00000185047 177 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm37698-201ENSMUST00000192605 463 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm43472-201ENSMUST00000200175 154 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm44446-201ENSMUST00000204864 255 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm18000-201ENSMUST00000212153 800 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm4987-201ENSMUST00000078326 408 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Snord15a-201ENSMUST00000083888 148 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Gm18432-201ENSMUST00000195568 1451 ntBASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
Ddx56Q9D0R4 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm25848-201ENSMUST00000116790 144 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm12071-201ENSMUST00000121968 469 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm22480-201ENSMUST00000122568 128 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm23257-201ENSMUST00000158322 132 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm20542-201ENSMUST00000174582 372 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm19898-201ENSMUST00000177490 251 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Mir6715-201ENSMUST00000184990 57 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm43284-201ENSMUST00000200103 253 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm43039-201ENSMUST00000202883 963 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 AC158981.3-202ENSMUST00000228906 523 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm25579-201ENSMUST00000083407 106 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm26166-201ENSMUST00000083788 107 ntBASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Ddx56Q9D0R4 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms