Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm26005-201ENSMUST00000158802 134 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm27520-201ENSMUST00000184872 81 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm29597-201ENSMUST00000188035 308 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm43239-201ENSMUST00000200131 201 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm43899-201ENSMUST00000203675 246 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm44520-201ENSMUST00000205447 802 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ddx28Q9CWT6 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm26423-201ENSMUST00000104277 128 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm26147-201ENSMUST00000104479 114 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm14622-201ENSMUST00000117117 468 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm11221-201ENSMUST00000117230 597 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm12191-201ENSMUST00000118307 348 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm9703-201ENSMUST00000119573 343 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm14392-201ENSMUST00000120332 401 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm14413-201ENSMUST00000122158 408 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm13368-201ENSMUST00000122443 430 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm25107-201ENSMUST00000122472 129 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm26194-201ENSMUST00000175036 71 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm24264-201ENSMUST00000179835 94 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm27796-201ENSMUST00000183863 261 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Mir7047-201ENSMUST00000184595 64 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm28755-201ENSMUST00000185773 199 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm28650-201ENSMUST00000188413 411 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm44041-201ENSMUST00000203678 396 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm7624-201ENSMUST00000209702 435 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm23136-201ENSMUST00000083425 99 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm10343-201ENSMUST00000096279 348 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm37788-201ENSMUST00000193958 2705 ntBASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Ddx28Q9CWT6 Gm381-201ENSMUST00000117443 2037 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm24889-201ENSMUST00000104388 132 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm16171-201ENSMUST00000118004 324 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm13717-201ENSMUST00000119868 365 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm15223-201ENSMUST00000120989 826 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm26277-201ENSMUST00000157097 152 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm25624-201ENSMUST00000157222 275 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm26100-201ENSMUST00000157245 127 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm22098-201ENSMUST00000157930 85 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm26335-201ENSMUST00000178449 107 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm27490-201ENSMUST00000184754 128 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm28414-201ENSMUST00000190111 294 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm9696-202ENSMUST00000191541 830 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm37743-201ENSMUST00000194645 376 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Gm22061-201ENSMUST00000082557 107 ntBASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ddx28Q9CWT6 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm15175-201ENSMUST00000117629 132 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Gm15936-201ENSMUST00000118706 460 ntBASIC2.92□□□□□ -1.94
Ddx28Q9CWT6 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms