Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Use1Q9CQ56 Gm24670-201ENSMUST00000104154 132 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm8217-201ENSMUST00000119136 465 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm15112-201ENSMUST00000120152 860 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm12607-201ENSMUST00000120724 493 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm25153-201ENSMUST00000157118 156 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm8207-201ENSMUST00000171204 502 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm24264-201ENSMUST00000179835 94 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm27220-201ENSMUST00000183453 262 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm27505-201ENSMUST00000185071 110 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm20058-201ENSMUST00000186939 284 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm45452-201ENSMUST00000210905 177 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Use1Q9CQ56 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Use1Q9CQ56 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm22622-201ENSMUST00000082870 129 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm26203-201ENSMUST00000082911 114 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm22154-201ENSMUST00000083844 131 ntBASIC2.26□□□□□ -2.05
Use1Q9CQ56 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Use1Q9CQ56 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Use1Q9CQ56 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm24403-201ENSMUST00000104616 130 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm13880-201ENSMUST00000118421 474 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm11784-201ENSMUST00000118568 474 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm12045-201ENSMUST00000122122 573 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm22483-201ENSMUST00000157986 274 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm23032-201ENSMUST00000157995 107 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm27676-201ENSMUST00000183669 61 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Mir7658-201ENSMUST00000184043 57 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm27761-201ENSMUST00000184091 131 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm18692-201ENSMUST00000193047 511 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm7299-201ENSMUST00000194441 581 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Mir7232-201ENSMUST00000197929 74 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm18488-201ENSMUST00000215082 364 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm22249-201ENSMUST00000082485 136 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm23727-201ENSMUST00000083352 164 ntBASIC2.25□□□□□ -2.05
Use1Q9CQ56 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Use1Q9CQ56 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm22497-201ENSMUST00000104499 131 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm15497-201ENSMUST00000119137 551 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm6664-201ENSMUST00000119138 468 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm12825-201ENSMUST00000120249 563 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm22554-201ENSMUST00000157798 147 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm24958-201ENSMUST00000158009 97 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm25373-201ENSMUST00000158156 115 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm24210-201ENSMUST00000158263 133 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm21726-201ENSMUST00000179654 392 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm44818-201ENSMUST00000206608 358 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.24□□□□□ -2.05
Use1Q9CQ56 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm24044-201ENSMUST00000083107 156 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm24610-201ENSMUST00000083270 109 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.24□□□□□ -2.05
Use1Q9CQ56 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
Use1Q9CQ56 Mir466k-201ENSMUST00000116774 122 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm22151-201ENSMUST00000116963 58 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm13510-201ENSMUST00000118659 429 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm15452-201ENSMUST00000119877 240 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm23642-201ENSMUST00000157858 258 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Mir1927-201ENSMUST00000158579 109 ntBASIC2.23□□□□□ -2.05
Use1Q9CQ56 Gm20794-201ENSMUST00000177626 628 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms