Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm24318-201ENSMUST00000104490 131 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm13378-201ENSMUST00000117483 336 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm15377-201ENSMUST00000119594 246 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm23169-201ENSMUST00000157157 112 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm23753-201ENSMUST00000157575 149 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm25643-201ENSMUST00000158874 103 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm29334-201ENSMUST00000190334 357 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm42672-201ENSMUST00000197821 352 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm45434-201ENSMUST00000210550 293 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm18015-201ENSMUST00000214879 316 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm23451-201ENSMUST00000083328 122 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Gm25937-201ENSMUST00000083912 107 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim8Q99PJ2 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.89□□□□□ -1.79
Trim8Q99PJ2 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Snord66-201ENSMUST00000104051 75 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm22493-201ENSMUST00000104494 132 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm15994-201ENSMUST00000118029 402 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm11384-201ENSMUST00000121376 303 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm25283-201ENSMUST00000157272 77 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm17186-201ENSMUST00000171742 456 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm22448-201ENSMUST00000179254 107 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm22633-201ENSMUST00000179834 107 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm23523-201ENSMUST00000180190 107 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm5372-201ENSMUST00000187540 409 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm29262-201ENSMUST00000190084 196 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm45101-201ENSMUST00000208327 232 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 CT010511.1-201ENSMUST00000224570 315 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm26447-201ENSMUST00000082448 129 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm23412-201ENSMUST00000083017 107 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Gm25411-201ENSMUST00000083760 151 ntBASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Trim8Q99PJ2 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm24889-201ENSMUST00000104388 132 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Mir466h-201ENSMUST00000104748 81 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm12173-201ENSMUST00000117622 273 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm11718-201ENSMUST00000119942 537 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm12190-201ENSMUST00000120001 187 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm12815-201ENSMUST00000121737 135 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm16358-201ENSMUST00000146046 210 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm22843-201ENSMUST00000157710 134 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm25454-201ENSMUST00000157947 315 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm23411-201ENSMUST00000157988 62 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm24224-201ENSMUST00000158828 258 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Mir5099-201ENSMUST00000175257 74 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Mir6933-201ENSMUST00000184982 81 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm7329-201ENSMUST00000185915 210 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm6802-202ENSMUST00000186566 126 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm17951-201ENSMUST00000198536 496 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm35931-201ENSMUST00000203931 448 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 CT009713.6-201ENSMUST00000223615 294 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 AC133156.1-202ENSMUST00000227284 363 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm24457-201ENSMUST00000083196 105 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim8Q99PJ2 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms