Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm25816-201ENSMUST00000179764 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm26188-201ENSMUST00000179963 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm26433-201ENSMUST00000180227 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm22128-201ENSMUST00000180346 94 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm27921-201ENSMUST00000183968 108 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm27608-201ENSMUST00000184822 162 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm28002-201ENSMUST00000184832 100 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm18433-202ENSMUST00000195682 196 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm46312-201ENSMUST00000220961 420 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 AC115289.1-201ENSMUST00000224915 522 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Gm24045-201ENSMUST00000083113 98 ntBASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Cstf3Q99LI7 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm14622-201ENSMUST00000117117 468 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm9043-201ENSMUST00000119677 314 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm11229-201ENSMUST00000121993 437 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm14578-201ENSMUST00000122166 391 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm22038-201ENSMUST00000157277 242 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm24720-201ENSMUST00000157518 166 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm8532-201ENSMUST00000179174 461 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm29429-201ENSMUST00000187071 121 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm9696-202ENSMUST00000191541 830 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm7039-201ENSMUST00000205138 346 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm45080-201ENSMUST00000206648 283 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Olfr936-202ENSMUST00000216912 937 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm29809-201ENSMUST00000218423 493 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 AC101984.1-201ENSMUST00000219639 402 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Mir101b-201ENSMUST00000083622 97 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Cstf3Q99LI7 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm13076-201ENSMUST00000118041 204 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm11512-201ENSMUST00000119669 663 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm15106-201ENSMUST00000119691 821 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm26275-201ENSMUST00000157101 268 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm20673-201ENSMUST00000177167 430 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm28211-201ENSMUST00000190920 315 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm43405-201ENSMUST00000198642 337 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm21007-201ENSMUST00000221024 326 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm9845-201ENSMUST00000056409 598 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm23925-201ENSMUST00000082471 132 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Gm26263-201ENSMUST00000083281 164 ntBASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cstf3Q99LI7 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 174.3 ms