Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm28437-201ENSMUST00000190277 783 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm37743-201ENSMUST00000194645 376 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm19089-201ENSMUST00000197207 613 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm18982-201ENSMUST00000198118 529 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm44923-201ENSMUST00000206673 85 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm22061-201ENSMUST00000082557 107 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm24150-201ENSMUST00000082759 104 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm23848-201ENSMUST00000083826 106 ntBASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
Nup88Q8CEC0 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.34□□□□□ -1.88
Nup88Q8CEC0 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.34□□□□□ -1.88
Nup88Q8CEC0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm12787-201ENSMUST00000119234 396 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm23325-201ENSMUST00000157422 129 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm23078-201ENSMUST00000157848 148 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm25361-201ENSMUST00000179358 76 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm27520-201ENSMUST00000184872 81 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm29073-201ENSMUST00000185563 664 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm29165-201ENSMUST00000190655 664 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm29211-201ENSMUST00000191470 664 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm18551-201ENSMUST00000195594 642 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm43521-201ENSMUST00000197838 255 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm43107-201ENSMUST00000198729 255 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm45387-201ENSMUST00000209792 632 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.33□□□□□ -1.88
Nup88Q8CEC0 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Gm22771-201ENSMUST00000104449 91 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Gm12225-201ENSMUST00000117995 298 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Gm14578-201ENSMUST00000122166 391 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Gm14804-201ENSMUST00000122322 508 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Gm23206-201ENSMUST00000122720 184 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Trbv22-201ENSMUST00000191697 291 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.32□□□□□ -1.88
Nup88Q8CEC0 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nup88Q8CEC0 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm8858-201ENSMUST00000118259 342 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm11785-201ENSMUST00000120165 601 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm8880-201ENSMUST00000121800 454 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm11471-201ENSMUST00000121824 198 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm12071-201ENSMUST00000121968 469 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm23886-201ENSMUST00000122684 313 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm23409-201ENSMUST00000158516 237 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm45101-201ENSMUST00000208327 232 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm45366-201ENSMUST00000209828 384 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Gm23741-201ENSMUST00000097237 171 ntBASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nup88Q8CEC0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm25728-201ENSMUST00000104525 159 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Mir291a-201ENSMUST00000104815 82 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm15936-201ENSMUST00000118706 460 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm23981-201ENSMUST00000157136 106 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm24439-201ENSMUST00000157894 117 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm24532-201ENSMUST00000157951 286 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm20698-201ENSMUST00000175657 233 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm24315-201ENSMUST00000177835 127 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm27028-201ENSMUST00000182303 399 ntBASIC3.3□□□□□ -1.88
Nup88Q8CEC0 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nup88Q8CEC0 Gm7837-201ENSMUST00000190873 412 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms