Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Atg4aQ8C9S8 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm14897-201ENSMUST00000118213 207 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm14049-201ENSMUST00000121009 636 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm26088-201ENSMUST00000157896 131 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm23583-201ENSMUST00000158533 289 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm19620-201ENSMUST00000195972 434 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm7495-201ENSMUST00000215099 426 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Gm22572-201ENSMUST00000082985 105 ntBASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Atg4aQ8C9S8 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm12492-201ENSMUST00000117665 564 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm12640-201ENSMUST00000120097 310 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm14867-201ENSMUST00000120156 866 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm14804-201ENSMUST00000122322 508 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm23668-201ENSMUST00000157465 111 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm23078-201ENSMUST00000157848 148 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm22651-201ENSMUST00000157872 94 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm9071-201ENSMUST00000165915 474 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm18588-201ENSMUST00000177308 492 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm23144-201ENSMUST00000180226 107 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm38109-201ENSMUST00000195386 181 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm44609-201ENSMUST00000207157 460 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 AC135019.1-201ENSMUST00000219949 307 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm24268-201ENSMUST00000082990 110 ntBASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Atg4aQ8C9S8 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm22290-201ENSMUST00000177655 107 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm22583-201ENSMUST00000178031 107 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm26189-201ENSMUST00000179879 107 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm26914-201ENSMUST00000182262 223 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm27580-201ENSMUST00000183666 149 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm27535-201ENSMUST00000183814 157 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm28163-201ENSMUST00000187099 325 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm6651-201ENSMUST00000189471 271 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm44393-201ENSMUST00000197418 138 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AC122341.1-201ENSMUST00000227291 560 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm23848-201ENSMUST00000083826 106 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.29□□□□□ -1.88
Atg4aQ8C9S8 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm11285-201ENSMUST00000118443 322 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm14392-201ENSMUST00000120332 401 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm14413-201ENSMUST00000122158 408 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm23124-201ENSMUST00000157650 107 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm24082-201ENSMUST00000175175 83 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Mir5101-201ENSMUST00000175181 83 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm27786-201ENSMUST00000184337 70 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm37658-201ENSMUST00000192672 315 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm29740-201ENSMUST00000193182 655 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm38329-201ENSMUST00000193473 427 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm44465-201ENSMUST00000199536 114 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.28□□□□□ -1.88
Atg4aQ8C9S8 Gm4921-201ENSMUST00000219804 992 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms