Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm23123-201ENSMUST00000157648 144 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm24727-201ENSMUST00000158231 144 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm8807-201ENSMUST00000179328 492 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm22633-201ENSMUST00000179834 107 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm43601-201ENSMUST00000196294 945 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 AC145736.2-201ENSMUST00000216305 365 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm9765-201ENSMUST00000043170 321 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm4987-201ENSMUST00000078326 408 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm26439-201ENSMUST00000082592 106 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm23055-201ENSMUST00000082805 94 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm23460-201ENSMUST00000083258 109 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm22740-201ENSMUST00000083439 109 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Usp40Q8BWR4 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Mir680-3-201ENSMUST00000102298 87 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm12025-201ENSMUST00000117768 144 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm22718-201ENSMUST00000122701 315 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm24100-201ENSMUST00000178592 79 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm24137-201ENSMUST00000180055 79 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm22391-201ENSMUST00000180356 79 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm27747-201ENSMUST00000184707 85 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Gm45006-201ENSMUST00000206078 690 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Usp40Q8BWR4 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.85□□□□□ -1.63
Usp40Q8BWR4 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm24676-201ENSMUST00000158758 75 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Mir3964-201ENSMUST00000174898 74 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm20630-201ENSMUST00000177387 551 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm27521-201ENSMUST00000184022 64 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm29062-201ENSMUST00000186032 694 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm28255-201ENSMUST00000187101 694 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Igkv2-105-201ENSMUST00000196931 377 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm43975-201ENSMUST00000203023 481 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm5955-201ENSMUST00000222712 219 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.84□□□□□ -1.63
Usp40Q8BWR4 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Usp40Q8BWR4 Gm37363-201ENSMUST00000192336 2233 ntBASIC4.84□□□□□ -1.64
Usp40Q8BWR4 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
Usp40Q8BWR4 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm24715-201ENSMUST00000102377 95 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm23424-201ENSMUST00000103889 110 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm16017-201ENSMUST00000119834 208 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm11325-201ENSMUST00000119967 469 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm13511-201ENSMUST00000121167 363 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm13725-201ENSMUST00000122139 207 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Trav20-201ENSMUST00000142754 347 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm22084-201ENSMUST00000157585 105 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm24167-201ENSMUST00000177733 124 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm22910-201ENSMUST00000178568 132 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm24028-201ENSMUST00000178991 124 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm18964-201ENSMUST00000193013 563 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm37817-201ENSMUST00000195276 434 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm18384-201ENSMUST00000195974 808 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Gm18213-201ENSMUST00000207850 178 ntBASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Usp40Q8BWR4 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Usp40Q8BWR4 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms