Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm7858-201ENSMUST00000190177 622 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm37575-201ENSMUST00000195467 309 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm9379-201ENSMUST00000196790 646 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm42526-201ENSMUST00000198956 393 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Mir691-201ENSMUST00000199719 78 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm43651-201ENSMUST00000199796 439 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm43976-201ENSMUST00000203637 235 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm44687-201ENSMUST00000204975 235 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm44870-201ENSMUST00000207291 357 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm44909-201ENSMUST00000208756 165 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm17989-201ENSMUST00000211543 412 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm5358-201ENSMUST00000212814 353 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm23404-201ENSMUST00000082543 97 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm22287-201ENSMUST00000083197 107 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm10161-201ENSMUST00000091506 204 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm14622-201ENSMUST00000117117 468 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm6274-201ENSMUST00000118173 797 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm12803-201ENSMUST00000118907 821 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm5762-201ENSMUST00000119204 258 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm22225-201ENSMUST00000157358 278 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm24061-201ENSMUST00000157489 120 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm24720-201ENSMUST00000157518 166 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm22521-201ENSMUST00000158272 134 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm22668-201ENSMUST00000158716 260 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm15914-201ENSMUST00000161922 309 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm17186-201ENSMUST00000171742 456 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm25198-201ENSMUST00000178574 110 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Mir6335-201ENSMUST00000184081 98 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm19777-201ENSMUST00000191940 358 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 AC140477.1-201ENSMUST00000222354 246 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm2710-201ENSMUST00000073196 603 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm23096-201ENSMUST00000083447 107 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Mir193a-201ENSMUST00000083461 66 ntBASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ubfd1Q78JW9 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm23256-201ENSMUST00000102235 110 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm26140-201ENSMUST00000103807 110 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm22936-201ENSMUST00000103955 126 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm23169-201ENSMUST00000157157 112 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm25519-201ENSMUST00000158392 127 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm24739-201ENSMUST00000158855 292 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm15900-201ENSMUST00000161584 342 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm17072-201ENSMUST00000166673 658 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm22908-201ENSMUST00000177620 110 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm9722-201ENSMUST00000194568 802 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm42647-201ENSMUST00000195939 459 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm45814-201ENSMUST00000212646 775 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 AL590614.1-201ENSMUST00000226037 268 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm25079-201ENSMUST00000082529 203 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm23850-201ENSMUST00000083830 169 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.46□□□□□ -1.86
Ubfd1Q78JW9 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ubfd1Q78JW9 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ubfd1Q78JW9 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ubfd1Q78JW9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 104.8 ms