Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm25339-201ENSMUST00000157458 232 ntBASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm19641-201ENSMUST00000188432 417 ntBASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm6059-201ENSMUST00000196903 340 ntBASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm24611-201ENSMUST00000083272 107 ntBASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm16261-201ENSMUST00000096813 205 ntBASIC1.96□□□□□ -2.09
Topbp1Q6ZQF0 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Gm15125-201ENSMUST00000116185 800 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Gm37119-201ENSMUST00000195691 389 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Gm31532-201ENSMUST00000203555 767 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Topbp1Q6ZQF0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Gm27044-201ENSMUST00000183033 796 ntBASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Gm6651-201ENSMUST00000189471 271 ntBASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Topbp1Q6ZQF0 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm26154-201ENSMUST00000102339 96 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Snord65-201ENSMUST00000104269 72 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm11352-201ENSMUST00000119264 517 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm11483-201ENSMUST00000119839 247 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm15147-201ENSMUST00000122263 483 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm22565-201ENSMUST00000175540 69 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm28169-201ENSMUST00000190342 345 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Mir211-201ENSMUST00000083651 106 ntBASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Topbp1Q6ZQF0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Topbp1Q6ZQF0 Gm15001-201ENSMUST00000117657 795 ntBASIC1.93□□□□□ -2.1
Topbp1Q6ZQF0 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC1.93□□□□□ -2.1
Topbp1Q6ZQF0 Gm23455-201ENSMUST00000083331 100 ntBASIC1.93□□□□□ -2.1
Topbp1Q6ZQF0 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.93□□□□□ -2.1
Topbp1Q6ZQF0 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Gm23221-201ENSMUST00000158118 93 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Gm5731-201ENSMUST00000190969 481 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Gm36997-201ENSMUST00000195090 707 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 AC165437.1-201ENSMUST00000228640 536 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Gm25199-201ENSMUST00000083095 104 ntBASIC1.92□□□□□ -2.1
Topbp1Q6ZQF0 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm6923-201ENSMUST00000118343 406 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm14008-201ENSMUST00000120483 274 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm22386-201ENSMUST00000158192 129 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm42438-201ENSMUST00000197832 974 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm44818-201ENSMUST00000206608 358 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 CT030662.3-201ENSMUST00000228751 476 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm11893-201ENSMUST00000117829 491 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm14940-201ENSMUST00000119309 495 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm22929-201ENSMUST00000175517 107 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Mir6238-201ENSMUST00000184140 129 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Igkv15-102-201ENSMUST00000197885 287 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Gm20948-201ENSMUST00000211091 449 ntBASIC1.91□□□□□ -2.1
Topbp1Q6ZQF0 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Gm14885-201ENSMUST00000117969 496 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Gm14907-201ENSMUST00000121948 854 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Gm7846-201ENSMUST00000145844 274 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Gm22561-201ENSMUST00000157331 84 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Gm18188-201ENSMUST00000219386 478 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 CT025157.1-201ENSMUST00000226241 292 ntBASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Topbp1Q6ZQF0 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 Gm43510-201ENSMUST00000197922 353 ntBASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 Gm44607-201ENSMUST00000205611 1090 ntBASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 Gm17976-201ENSMUST00000184037 1909 ntBASIC1.89□□□□□ -2.11
Topbp1Q6ZQF0 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.88□□□□□ -2.11
Topbp1Q6ZQF0 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms