Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Hmgb4Q6P8W9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm14293-201ENSMUST00000118528 577 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm15760-201ENSMUST00000119553 283 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm14362-201ENSMUST00000121679 273 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm12071-201ENSMUST00000121968 469 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm12368-201ENSMUST00000122251 434 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm15254-201ENSMUST00000149567 273 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm25559-201ENSMUST00000157182 74 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm22563-201ENSMUST00000157333 269 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm26041-201ENSMUST00000158148 108 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm22841-201ENSMUST00000158443 62 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Mir3106-201ENSMUST00000175401 82 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Mir3965-201ENSMUST00000175570 69 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm22633-201ENSMUST00000179834 107 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm11395-201ENSMUST00000181011 499 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm27520-201ENSMUST00000184872 81 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm29216-201ENSMUST00000187117 492 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm31123-201ENSMUST00000192094 666 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm18982-201ENSMUST00000198118 529 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm2676-201ENSMUST00000207279 606 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm44961-201ENSMUST00000207450 196 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm18015-201ENSMUST00000214879 316 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm18113-201ENSMUST00000220630 303 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm24268-201ENSMUST00000082990 110 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm22970-201ENSMUST00000083304 186 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm23741-201ENSMUST00000097237 171 ntBASIC3.09□□□□□ -1.91
Hmgb4Q6P8W9 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm17186-201ENSMUST00000171742 456 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm26652-202ENSMUST00000181672 475 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm27796-201ENSMUST00000183863 261 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Mir8106-201ENSMUST00000184520 139 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm28534-201ENSMUST00000187744 676 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm28404-201ENSMUST00000190242 453 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm37743-201ENSMUST00000194645 376 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm35931-201ENSMUST00000203931 448 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm45101-201ENSMUST00000208327 232 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm23738-201ENSMUST00000082828 171 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Hmgb4Q6P8W9 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Mir1195-201ENSMUST00000116818 98 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm13614-201ENSMUST00000117306 503 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm9225-201ENSMUST00000121921 836 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm16354-201ENSMUST00000155376 150 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm23124-201ENSMUST00000157650 107 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm24691-201ENSMUST00000157762 140 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm24532-201ENSMUST00000157951 286 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Mir5136-201ENSMUST00000175573 76 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm44324-201ENSMUST00000198517 135 ntBASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Hmgb4Q6P8W9 Mir450-2-201ENSMUST00000102444 69 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm25773-201ENSMUST00000116718 127 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm11582-201ENSMUST00000121041 236 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm17166-201ENSMUST00000172006 431 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm22851-201ENSMUST00000178741 94 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm25074-201ENSMUST00000178782 94 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm27957-201ENSMUST00000184054 127 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm28343-201ENSMUST00000185386 112 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.06□□□□□ -1.92
Hmgb4Q6P8W9 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms