Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm5955-201ENSMUST00000222712 219 ntBASIC2.42□□□□□ -2.02
Usf1Q61069 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.42□□□□□ -2.02
Usf1Q61069 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.42□□□□□ -2.02
Usf1Q61069 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Usf1Q61069 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Usf1Q61069 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Usf1Q61069 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Usf1Q61069 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.42□□□□□ -2.02
Usf1Q61069 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
Usf1Q61069 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Usf1Q61069 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Usf1Q61069 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Usf1Q61069 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Usf1Q61069 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Usf1Q61069 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26504-201ENSMUST00000102033 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Usf1Q61069 Gm13329-201ENSMUST00000117063 265 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm12814-201ENSMUST00000117091 846 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm14943-201ENSMUST00000118056 546 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm11784-201ENSMUST00000118568 474 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm14843-201ENSMUST00000119596 212 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm15536-201ENSMUST00000121411 114 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm11363-201ENSMUST00000121672 548 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm11819-201ENSMUST00000122192 372 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Usf1Q61069 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Usf1Q61069 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26271-201ENSMUST00000158349 104 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm16588-201ENSMUST00000162889 355 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm2930-201ENSMUST00000170403 474 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26502-201ENSMUST00000177732 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm25350-201ENSMUST00000177849 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm23446-201ENSMUST00000177977 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26201-201ENSMUST00000178047 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm24711-201ENSMUST00000178062 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm24609-201ENSMUST00000178166 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm23265-201ENSMUST00000178321 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm22812-201ENSMUST00000178329 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26246-201ENSMUST00000178388 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm25155-201ENSMUST00000178450 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm24760-201ENSMUST00000178530 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm22285-201ENSMUST00000178576 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm22417-201ENSMUST00000178656 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26270-201ENSMUST00000178690 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm23313-201ENSMUST00000178931 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm23089-201ENSMUST00000178947 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm24153-201ENSMUST00000179280 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm21758-201ENSMUST00000179336 819 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm25597-201ENSMUST00000179388 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm25816-201ENSMUST00000179764 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26188-201ENSMUST00000179963 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm26433-201ENSMUST00000180227 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm22128-201ENSMUST00000180346 94 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm27659-201ENSMUST00000183472 98 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Mir8106-201ENSMUST00000184520 139 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm27369-201ENSMUST00000185182 71 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm29335-201ENSMUST00000188361 459 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm29647-201ENSMUST00000188795 666 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm20832-201ENSMUST00000189076 665 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm28241-201ENSMUST00000190916 235 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm28504-201ENSMUST00000190977 666 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm38280-201ENSMUST00000192610 158 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm31511-201ENSMUST00000193134 657 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm35843-201ENSMUST00000193716 666 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm30638-201ENSMUST00000195570 656 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm36728-201ENSMUST00000195782 665 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC2.41□□□□□ -2.02
Usf1Q61069 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Gm18691-201ENSMUST00000203593 872 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Usf1Q61069 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Usf1Q61069 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.41□□□□□ -2.02
Usf1Q61069 Gm32300-201ENSMUST00000221735 515 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 AC162934.3-201ENSMUST00000223015 841 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.41□□□□□ -2.02
Usf1Q61069 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Usf1Q61069 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Usf1Q61069 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Usf1Q61069 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Usf1Q61069 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms