Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm29299-201ENSMUST00000185609 923 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm29573-201ENSMUST00000190291 919 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm18341-201ENSMUST00000197538 622 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm44011-201ENSMUST00000203336 394 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm19563-201ENSMUST00000222031 270 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Olfr815-201ENSMUST00000071557 951 ntBASIC2.11□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm43911-201ENSMUST00000203097 76 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm20948-201ENSMUST00000211091 449 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm7984-201ENSMUST00000060640 538 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Mir148b-201ENSMUST00000083626 97 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm24280-201ENSMUST00000104237 134 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm26301-201ENSMUST00000104813 95 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm14841-201ENSMUST00000121067 758 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm13424-201ENSMUST00000122301 354 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm22960-201ENSMUST00000122517 104 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm22478-201ENSMUST00000122570 154 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm24960-201ENSMUST00000157923 90 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm22307-201ENSMUST00000180019 107 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm25792-201ENSMUST00000083289 100 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm45263-201ENSMUST00000210377 1375 ntBASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc88aQ5SNZ0 Gm2348-201ENSMUST00000108782 300 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm13678-201ENSMUST00000118926 340 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm14517-201ENSMUST00000119040 337 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm15115-201ENSMUST00000121145 264 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm27921-201ENSMUST00000183968 108 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm28163-201ENSMUST00000187099 325 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.09□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm8121-201ENSMUST00000153583 499 ntBASIC2.08□□□□□ -2.08
Ccdc88aQ5SNZ0 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms