Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mir6372-201ENSMUST00000185114 109 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm37987-201ENSMUST00000194999 825 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm37029-201ENSMUST00000195773 239 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.08□□□□□ -2.24
Trav3-1Q5R1I8 Gm25495-201ENSMUST00000104431 131 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm14932-201ENSMUST00000117112 453 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm15312-201ENSMUST00000118827 271 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm14428-201ENSMUST00000120408 822 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm14678-201ENSMUST00000121396 482 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm23429-201ENSMUST00000122486 149 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm24968-201ENSMUST00000179817 107 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm29263-201ENSMUST00000188718 463 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm28384-201ENSMUST00000189079 463 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm18747-201ENSMUST00000198129 648 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm42474-201ENSMUST00000201073 505 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm23615-201ENSMUST00000082602 65 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Gm23975-201ENSMUST00000082685 106 ntBASIC1.07□□□□□ -2.24
Trav3-1Q5R1I8 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm12640-201ENSMUST00000120097 310 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm13751-201ENSMUST00000120280 752 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm13080-201ENSMUST00000120556 420 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm24998-201ENSMUST00000157908 89 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm22159-201ENSMUST00000158412 130 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm25035-201ENSMUST00000175414 77 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm25936-201ENSMUST00000179952 114 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Mir7235-201ENSMUST00000183796 56 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm18692-201ENSMUST00000193047 511 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Mir6925-201ENSMUST00000197857 70 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm30534-201ENSMUST00000217928 207 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm2446-201ENSMUST00000220144 772 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
Trav3-1Q5R1I8 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm23907-201ENSMUST00000104595 189 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm11845-201ENSMUST00000117886 327 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm14770-201ENSMUST00000122197 312 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm26345-201ENSMUST00000157534 120 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm23043-201ENSMUST00000157890 109 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm22663-201ENSMUST00000158721 102 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm26157-201ENSMUST00000158974 126 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm17187-201ENSMUST00000164622 410 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm17072-201ENSMUST00000166673 658 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm28900-201ENSMUST00000185232 156 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm37684-201ENSMUST00000192779 355 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm33354-201ENSMUST00000195448 906 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm42774-201ENSMUST00000198854 283 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm44526-201ENSMUST00000204664 121 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm44634-201ENSMUST00000206119 152 ntBASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Trav3-1Q5R1I8 Mir804-201ENSMUST00000103251 95 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm14360-201ENSMUST00000120670 393 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm25621-201ENSMUST00000157223 114 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm22217-201ENSMUST00000157556 313 ntBASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.04□□□□□ -2.24
Trav3-1Q5R1I8 Gm4540-201ENSMUST00000170669 429 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 101.7 ms