Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Trdv3-201ENSMUST00000198551 309 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Gm44548-201ENSMUST00000208929 192 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Gm45522-201ENSMUST00000210784 166 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Gm45530-201ENSMUST00000211658 225 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Col27a1Q5QNQ9 Mir301b-201ENSMUST00000102333 97 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm25274-201ENSMUST00000104296 135 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm15193-201ENSMUST00000120224 865 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Defa-ps6-201ENSMUST00000122172 282 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm25026-201ENSMUST00000175017 188 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm24111-201ENSMUST00000175491 97 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm22252-201ENSMUST00000179316 79 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm29604-201ENSMUST00000187176 163 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm19193-201ENSMUST00000190263 590 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm37455-201ENSMUST00000191993 529 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm42976-201ENSMUST00000200313 222 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm45048-201ENSMUST00000207058 429 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Col27a1Q5QNQ9 Gm12513-201ENSMUST00000118617 352 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm13273-201ENSMUST00000119737 159 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm8121-201ENSMUST00000153583 499 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm26365-201ENSMUST00000179177 94 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Mir7016-201ENSMUST00000184308 72 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm44609-201ENSMUST00000207157 460 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm21089-201ENSMUST00000215843 325 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Platr25-208ENSMUST00000222602 939 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 n-R5s50-201ENSMUST00000083168 111 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.84□□□□□ -2.11
Col27a1Q5QNQ9 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Gm16100-201ENSMUST00000120489 231 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Gm7350-201ENSMUST00000120964 636 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Gm38238-201ENSMUST00000194334 346 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Gm18892-201ENSMUST00000217628 881 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 AC157772.2-201ENSMUST00000228202 259 ntBASIC1.84□□□□□ -2.12
Col27a1Q5QNQ9 Gm6913-201ENSMUST00000100019 348 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm25090-201ENSMUST00000104000 132 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm14882-201ENSMUST00000117216 218 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm12889-201ENSMUST00000118684 241 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm22960-201ENSMUST00000122517 104 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm9022-202ENSMUST00000183285 483 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm44011-201ENSMUST00000203336 394 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm44137-201ENSMUST00000203670 367 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm7984-201ENSMUST00000060640 538 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Gm24661-201ENSMUST00000083205 104 ntBASIC1.83□□□□□ -2.12
Col27a1Q5QNQ9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm13627-201ENSMUST00000119700 706 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm13424-201ENSMUST00000122301 354 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm22478-201ENSMUST00000122570 154 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm23886-201ENSMUST00000122684 313 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm17064-201ENSMUST00000167690 452 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Mir6383-201ENSMUST00000184545 116 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm28745-201ENSMUST00000190069 305 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm20915-201ENSMUST00000191575 663 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm19649-201ENSMUST00000201126 822 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 AC154692.1-201ENSMUST00000228314 544 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Mir421-201ENSMUST00000083575 76 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Mir350-201ENSMUST00000083639 99 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm14588-201ENSMUST00000119895 172 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm11252-201ENSMUST00000120572 939 ntBASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.82□□□□□ -2.12
Col27a1Q5QNQ9 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms