Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm37412-201ENSMUST00000194866 4321 ntBASIC7.89□□□□□ -1.15
Trim41Q5NCC3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim41Q5NCC3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim41Q5NCC3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Trim41Q5NCC3 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim41Q5NCC3 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Trim41Q5NCC3 Gm24831-201ENSMUST00000116778 126 ntBASIC7.88□□□□□ -1.15
Trim41Q5NCC3 Gm12683-201ENSMUST00000117528 415 ntBASIC7.88□□□□□ -1.15
Trim41Q5NCC3 Gm12335-201ENSMUST00000119738 327 ntBASIC7.88□□□□□ -1.15
Trim41Q5NCC3 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim41Q5NCC3 Gm23982-201ENSMUST00000157141 106 ntBASIC7.88□□□□□ -1.15
Trim41Q5NCC3 Gm8790-201ENSMUST00000194108 322 ntBASIC7.88□□□□□ -1.15
Trim41Q5NCC3 AC164304.1-201ENSMUST00000226920 272 ntBASIC7.88□□□□□ -1.15
Trim41Q5NCC3 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim41Q5NCC3 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm45854-201ENSMUST00000211857 3488 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm13961-201ENSMUST00000119282 4772 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm20342-201ENSMUST00000185480 9720 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm23319-201ENSMUST00000104467 131 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm14894-201ENSMUST00000117170 270 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm13210-201ENSMUST00000121483 273 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm15065-201ENSMUST00000121699 273 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm22699-201ENSMUST00000175376 105 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm13249-201ENSMUST00000177803 345 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm13144-201ENSMUST00000179385 345 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm25121-201ENSMUST00000179846 79 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm37449-201ENSMUST00000193016 270 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm18658-201ENSMUST00000195558 270 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm45013-201ENSMUST00000206883 178 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm44824-201ENSMUST00000207021 229 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Gm25818-201ENSMUST00000083282 164 ntBASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim41Q5NCC3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm24234-201ENSMUST00000104316 107 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm23743-201ENSMUST00000157389 274 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm23098-201ENSMUST00000157552 299 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm24015-201ENSMUST00000157725 232 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm17186-201ENSMUST00000171742 456 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm29005-201ENSMUST00000186773 320 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm9616-201ENSMUST00000221154 781 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm43024-201ENSMUST00000196770 4352 ntBASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Trim41Q5NCC3 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim41Q5NCC3 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm12125-201ENSMUST00000117261 736 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm11718-201ENSMUST00000119942 537 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm25985-201ENSMUST00000122677 107 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm7182-201ENSMUST00000193351 732 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm44208-201ENSMUST00000205199 421 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm16419-201ENSMUST00000221057 625 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Gm22062-201ENSMUST00000082563 107 ntBASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
Trim41Q5NCC3 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim41Q5NCC3 AC149588.1-201ENSMUST00000228274 3745 ntBASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Gm24537-201ENSMUST00000157950 102 ntBASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Gm24224-201ENSMUST00000158828 258 ntBASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Mir721-201ENSMUST00000200230 88 ntBASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Gm37236-201ENSMUST00000193670 3249 ntBASIC7.84□□□□□ -1.15
Trim41Q5NCC3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
Trim41Q5NCC3 AC153969.1-201ENSMUST00000214047 2605 ntBASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Gm37504-201ENSMUST00000192537 2374 ntBASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Mir592-201ENSMUST00000102113 96 ntBASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Gm12568-201ENSMUST00000117362 624 ntBASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Gm14880-201ENSMUST00000117581 292 ntBASIC7.83□□□□□ -1.16
Trim41Q5NCC3 Gm14619-201ENSMUST00000120480 168 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 114 ms