Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Mir6541-201ENSMUST00000183649 110 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Gm35570-201ENSMUST00000198730 681 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Gm43979-201ENSMUST00000203179 475 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Gm43978-201ENSMUST00000203491 451 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Gm35931-201ENSMUST00000203931 448 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ccdc88bQ4QRL3 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Ccdc88bQ4QRL3 Gm22698-201ENSMUST00000175375 108 ntBASIC2.04□□□□□ -2.08
Ccdc88bQ4QRL3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Ccdc88bQ4QRL3 Gm20561-201ENSMUST00000188131 292 ntBASIC2.04□□□□□ -2.08
Ccdc88bQ4QRL3 Gm43659-201ENSMUST00000200894 628 ntBASIC2.04□□□□□ -2.08
Ccdc88bQ4QRL3 Gm26154-201ENSMUST00000102339 96 ntBASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 Gm24541-201ENSMUST00000103871 96 ntBASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 Gm13331-201ENSMUST00000117500 448 ntBASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 Gm15443-201ENSMUST00000118947 820 ntBASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 Gm37987-201ENSMUST00000194999 825 ntBASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 Gm43371-201ENSMUST00000202838 1031 ntBASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC2.03□□□□□ -2.08
Ccdc88bQ4QRL3 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Gm14238-201ENSMUST00000120227 323 ntBASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Gm14709-201ENSMUST00000121225 304 ntBASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Gm23137-201ENSMUST00000157559 107 ntBASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Mir6371-201ENSMUST00000184470 111 ntBASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 AC160550.1-201ENSMUST00000228659 181 ntBASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ccdc88bQ4QRL3 Gm27698-201ENSMUST00000184060 249 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm37431-201ENSMUST00000195102 111 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm18991-201ENSMUST00000209225 746 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm14770-201ENSMUST00000122197 312 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm25312-201ENSMUST00000178972 107 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88bQ4QRL3 Gm5224-201ENSMUST00000183060 350 ntBASIC2□□□□□ -2.09
Ccdc88bQ4QRL3 Gm6985-201ENSMUST00000121255 271 ntBASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 Gm27427-201ENSMUST00000185134 193 ntBASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Gm25497-201ENSMUST00000104425 132 ntBASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Gm22897-201ENSMUST00000197860 128 ntBASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.98□□□□□ -2.09
Ccdc88bQ4QRL3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Gm11935-201ENSMUST00000118608 399 ntBASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Gm22766-201ENSMUST00000158372 99 ntBASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Gm44830-201ENSMUST00000207667 584 ntBASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Gm37879-201ENSMUST00000193112 1995 ntBASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.97□□□□□ -2.09
Ccdc88bQ4QRL3 Gm15001-201ENSMUST00000117657 795 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm13239-201ENSMUST00000119920 637 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm23893-201ENSMUST00000158106 134 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm24348-201ENSMUST00000158710 130 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm22136-201ENSMUST00000158751 268 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm28951-201ENSMUST00000190742 313 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm32033-201ENSMUST00000193483 339 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm43865-201ENSMUST00000204721 127 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Gm26493-201ENSMUST00000083155 136 ntBASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Ccdc88bQ4QRL3 n-R5s26-201ENSMUST00000104601 122 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm14894-201ENSMUST00000117170 270 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm14366-201ENSMUST00000121970 730 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm13901-201ENSMUST00000137252 468 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm25198-201ENSMUST00000178574 110 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm22254-201ENSMUST00000179186 110 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm37449-201ENSMUST00000193016 270 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm18658-201ENSMUST00000195558 270 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm18546-201ENSMUST00000197245 676 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm5317-201ENSMUST00000204445 847 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.95□□□□□ -2.1
Ccdc88bQ4QRL3 Gm45456-201ENSMUST00000210841 243 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms