Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm8676-201ENSMUST00000184206 637 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Mir7226-201ENSMUST00000184953 60 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm6801-201ENSMUST00000190697 339 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm29754-201ENSMUST00000206269 358 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm45048-201ENSMUST00000207058 429 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm45439-201ENSMUST00000211723 359 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm25582-201ENSMUST00000083412 110 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
Upf3aQ3ULJ3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Mir883a-201ENSMUST00000104824 76 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm22486-201ENSMUST00000116815 137 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm12876-201ENSMUST00000120975 408 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm26406-201ENSMUST00000158503 124 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm20698-201ENSMUST00000175657 233 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm23190-201ENSMUST00000180307 64 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm28779-201ENSMUST00000189678 323 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm43587-201ENSMUST00000199590 204 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Mir497-201ENSMUST00000200557 84 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm45614-201ENSMUST00000209994 721 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm46136-201ENSMUST00000214730 565 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm23932-201ENSMUST00000082914 107 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.52□□□□□ -2.01
Upf3aQ3ULJ3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Mir542-201ENSMUST00000102186 85 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm14007-201ENSMUST00000118288 210 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm5646-201ENSMUST00000120568 714 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm14915-201ENSMUST00000120747 204 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm23111-201ENSMUST00000122652 105 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm2855-201ENSMUST00000166765 456 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm3104-201ENSMUST00000171004 473 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm25873-201ENSMUST00000180317 107 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm27676-201ENSMUST00000183669 61 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Mir6371-201ENSMUST00000184470 111 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm28399-201ENSMUST00000186221 318 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm28572-201ENSMUST00000187444 318 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm28647-201ENSMUST00000188416 197 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm18982-201ENSMUST00000198118 529 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm44212-201ENSMUST00000205016 897 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm45636-201ENSMUST00000210497 1064 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Gm26128-201ENSMUST00000083170 110 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Upf3aQ3ULJ3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm26002-201ENSMUST00000101915 107 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm25526-201ENSMUST00000104332 132 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm14940-201ENSMUST00000119309 495 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm2930-201ENSMUST00000170403 474 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm25874-201ENSMUST00000178030 79 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm22264-201ENSMUST00000178200 107 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Mir6402-201ENSMUST00000183406 80 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm29192-201ENSMUST00000190942 377 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm44830-201ENSMUST00000207667 584 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm45395-201ENSMUST00000209891 559 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm24707-201ENSMUST00000082812 107 ntBASIC2.5□□□□□ -2.01
Upf3aQ3ULJ3 Gm22265-201ENSMUST00000082947 116 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms