Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm38044-201ENSMUST00000192964 487 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm29950-201ENSMUST00000195273 237 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm22810-201ENSMUST00000082741 158 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm24292-201ENSMUST00000082888 107 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm22674-201ENSMUST00000104413 131 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm22771-201ENSMUST00000104449 91 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm13751-201ENSMUST00000120280 752 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm11414-201ENSMUST00000121795 263 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm12045-201ENSMUST00000122122 573 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm13602-201ENSMUST00000122405 493 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm5958-201ENSMUST00000147698 297 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm23599-201ENSMUST00000157261 251 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm25280-201ENSMUST00000157269 101 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm22849-201ENSMUST00000157713 307 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm3370-201ENSMUST00000171785 500 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm22716-201ENSMUST00000177596 107 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm27161-201ENSMUST00000183960 562 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm27608-201ENSMUST00000184822 162 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm43513-201ENSMUST00000199779 1076 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm44060-201ENSMUST00000204440 410 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm44718-201ENSMUST00000206886 359 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 AC171206.2-201ENSMUST00000215252 389 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 AC073947.3-201ENSMUST00000215576 766 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm3442-201ENSMUST00000216808 710 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.66□□□□□ -1.98
Trafd1Q3UDK1 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.65□□□□□ -1.98
Trafd1Q3UDK1 Gm25500-201ENSMUST00000104426 123 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm13614-201ENSMUST00000117306 503 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm9009-201ENSMUST00000117321 326 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm15282-201ENSMUST00000117707 300 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm12825-201ENSMUST00000120249 563 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm11582-201ENSMUST00000121041 236 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm25270-201ENSMUST00000122606 138 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm23887-201ENSMUST00000122683 172 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm22793-201ENSMUST00000157227 330 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm24879-201ENSMUST00000158386 143 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm23022-201ENSMUST00000158768 180 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm4076-201ENSMUST00000179230 965 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm31123-201ENSMUST00000192094 666 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm42924-201ENSMUST00000197261 185 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm43521-201ENSMUST00000197838 255 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm43107-201ENSMUST00000198729 255 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm42578-201ENSMUST00000199960 194 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm45590-201ENSMUST00000209715 262 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm22970-201ENSMUST00000083304 186 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm22740-201ENSMUST00000083439 109 ntBASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trafd1Q3UDK1 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Trafd1Q3UDK1 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms