Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm15331-201ENSMUST00000120225 385 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm13797-201ENSMUST00000121792 120 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm24650-201ENSMUST00000157105 103 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm23539-201ENSMUST00000157537 224 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm23536-201ENSMUST00000157541 134 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm23965-201ENSMUST00000157969 142 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm24726-201ENSMUST00000158232 121 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Mir3097-201ENSMUST00000175356 67 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm27477-201ENSMUST00000184649 143 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm17966-201ENSMUST00000193453 594 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm4321-201ENSMUST00000200520 442 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm44030-201ENSMUST00000204865 432 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 AC132615.1-201ENSMUST00000213873 255 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm9616-201ENSMUST00000221154 781 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 CT030242.2-201ENSMUST00000221588 148 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm22681-201ENSMUST00000083853 106 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm7957-201ENSMUST00000207404 2602 ntBASIC5.16□□□□□ -1.58
Rnf40Q3U319 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf40Q3U319 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.15□□□□□ -1.58
Rnf40Q3U319 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Rnf40Q3U319 Gm20486-201ENSMUST00000101544 128 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm23440-201ENSMUST00000104299 130 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm23320-201ENSMUST00000104462 127 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm22959-201ENSMUST00000122514 303 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm23331-201ENSMUST00000157423 108 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm23817-201ENSMUST00000158449 104 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm25444-201ENSMUST00000158999 113 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Mir6418-201ENSMUST00000185075 115 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.15□□□□□ -1.59
Rnf40Q3U319 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm23972-201ENSMUST00000083322 165 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Mir99a-201ENSMUST00000083596 65 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm2123-201ENSMUST00000221476 2836 ntBASIC5.15□□□□□ -1.59
Rnf40Q3U319 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf40Q3U319 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf40Q3U319 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Rnf40Q3U319 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf40Q3U319 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Rnf40Q3U319 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Mir700-201ENSMUST00000102169 79 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm14237-201ENSMUST00000122080 430 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm25543-201ENSMUST00000122678 312 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm13092-201ENSMUST00000136346 260 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm23434-201ENSMUST00000157179 100 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm23250-201ENSMUST00000157444 267 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm22210-201ENSMUST00000158101 144 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm24552-201ENSMUST00000158646 103 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Mir669j-201ENSMUST00000179023 121 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm27220-201ENSMUST00000183453 262 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm37923-201ENSMUST00000191624 161 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm37361-201ENSMUST00000194345 132 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm42844-201ENSMUST00000200355 112 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm44879-201ENSMUST00000207007 503 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm18592-201ENSMUST00000221529 276 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm23456-201ENSMUST00000083335 137 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Rnf40Q3U319 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC5.14□□□□□ -1.59
Rnf40Q3U319 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Rnf40Q3U319 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm24886-201ENSMUST00000104384 123 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Mir1b-201ENSMUST00000117012 122 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm13756-201ENSMUST00000117618 222 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm13232-201ENSMUST00000121816 632 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm8061-201ENSMUST00000122380 350 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm26027-201ENSMUST00000122725 268 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm25961-201ENSMUST00000157174 135 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm26049-201ENSMUST00000157313 108 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm22429-201ENSMUST00000158553 130 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm27849-201ENSMUST00000183673 125 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Snora19-201ENSMUST00000082962 132 ntBASIC5.13□□□□□ -1.59
Rnf40Q3U319 Gm23658-201ENSMUST00000083233 132 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms