Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col9a1Q05722 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm15902-202ENSMUST00000219623 3477 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm5762-201ENSMUST00000119204 258 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm22986-201ENSMUST00000122753 130 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm23993-201ENSMUST00000157478 144 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm25364-201ENSMUST00000158851 107 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm7497-201ENSMUST00000183064 1003 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm37081-201ENSMUST00000192034 196 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm44485-201ENSMUST00000199569 137 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm9377-201ENSMUST00000207227 623 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm23099-201ENSMUST00000083454 139 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm45393-201ENSMUST00000211634 2631 ntBASIC5.08□□□□□ -1.6
Col9a1Q05722 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col9a1Q05722 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm26248-201ENSMUST00000116700 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm26137-201ENSMUST00000116701 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm26190-201ENSMUST00000116704 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24617-201ENSMUST00000116705 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25778-201ENSMUST00000116713 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25774-201ENSMUST00000116717 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22102-201ENSMUST00000116730 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm23177-201ENSMUST00000116784 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24193-201ENSMUST00000116801 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24744-201ENSMUST00000116833 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24427-201ENSMUST00000116896 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22346-201ENSMUST00000116918 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm23606-201ENSMUST00000116938 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22029-201ENSMUST00000116940 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm26298-201ENSMUST00000116956 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm23844-201ENSMUST00000116959 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24484-201ENSMUST00000117009 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25347-201ENSMUST00000117026 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22112-201ENSMUST00000117032 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25269-201ENSMUST00000122601 104 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22316-201ENSMUST00000158012 216 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24314-201ENSMUST00000158274 123 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25817-201ENSMUST00000177758 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22991-201ENSMUST00000178126 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22070-201ENSMUST00000178475 107 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25754-201ENSMUST00000178653 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm22419-201ENSMUST00000178780 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24802-201ENSMUST00000178897 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25208-201ENSMUST00000178964 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24766-201ENSMUST00000179182 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm24567-201ENSMUST00000179294 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm25228-201ENSMUST00000180121 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm23304-201ENSMUST00000180209 121 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC5.07□□□□□ -1.6
Col9a1Q05722 Gm38088-201ENSMUST00000195829 241 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 Mir129b-201ENSMUST00000197461 65 ntBASIC5.07□□□□□ -1.6
Col9a1Q05722 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms