Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm42453-201ENSMUST00000200477 409 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm34091-201ENSMUST00000200875 604 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm44294-201ENSMUST00000205090 728 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm45772-201ENSMUST00000212961 240 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm46194-201ENSMUST00000218136 320 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm25812-201ENSMUST00000082751 103 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Snord14e-201ENSMUST00000082857 90 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm25821-201ENSMUST00000093657 133 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Col8a1Q00780 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col8a1Q00780 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Col8a1Q00780 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col8a1Q00780 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm42842-201ENSMUST00000197736 3004 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm24423-201ENSMUST00000101982 106 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm24121-201ENSMUST00000102029 106 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm24376-201ENSMUST00000104399 127 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm16242-201ENSMUST00000117741 334 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm22084-201ENSMUST00000157585 105 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm25223-201ENSMUST00000158200 110 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm23209-201ENSMUST00000158667 110 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Mir6385-201ENSMUST00000184295 105 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm38080-201ENSMUST00000194035 268 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm42623-201ENSMUST00000197225 379 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm44881-201ENSMUST00000205425 367 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm39197-201ENSMUST00000212069 457 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.66□□□□□ -1.82
Col8a1Q00780 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.66□□□□□ -1.82
Col8a1Q00780 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.66□□□□□ -1.82
Col8a1Q00780 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Col8a1Q00780 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Col8a1Q00780 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Col8a1Q00780 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col8a1Q00780 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Col8a1Q00780 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.65□□□□□ -1.82
Col8a1Q00780 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.65□□□□□ -1.82
Col8a1Q00780 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col8a1Q00780 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.65□□□□□ -1.82
Col8a1Q00780 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col8a1Q00780 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col8a1Q00780 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Col8a1Q00780 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Col8a1Q00780 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm26147-201ENSMUST00000104479 114 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm12760-201ENSMUST00000117861 482 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm5937-201ENSMUST00000119715 643 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm3788-201ENSMUST00000119949 136 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm25321-201ENSMUST00000122558 102 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm26036-201ENSMUST00000158149 144 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm23312-201ENSMUST00000158774 102 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm10292-201ENSMUST00000183142 581 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm27233-201ENSMUST00000184030 307 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm27608-201ENSMUST00000184822 162 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm9696-202ENSMUST00000191541 830 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm36946-201ENSMUST00000192706 435 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.65□□□□□ -1.83
Col8a1Q00780 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Col8a1Q00780 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm8820-201ENSMUST00000204077 571 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm44879-201ENSMUST00000207007 503 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm44533-201ENSMUST00000207782 268 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm45101-201ENSMUST00000208327 232 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col8a1Q00780 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm10916-201ENSMUST00000080330 483 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm26055-201ENSMUST00000083038 107 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm43882-201ENSMUST00000204871 2264 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm43605-201ENSMUST00000199663 3426 ntBASIC3.65□□□□□ -1.83
Col8a1Q00780 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col8a1Q00780 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Col8a1Q00780 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Col8a1Q00780 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms