Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm21626-201ENSMUST00000177791 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21562-201ENSMUST00000177888 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21539-201ENSMUST00000177925 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17522-201ENSMUST00000178144 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21599-201ENSMUST00000178249 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm22131-201ENSMUST00000178415 94 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21914-201ENSMUST00000178452 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21723-201ENSMUST00000178692 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21916-201ENSMUST00000178771 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21801-201ENSMUST00000178865 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21633-201ENSMUST00000178941 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21821-201ENSMUST00000179646 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm24464-201ENSMUST00000179697 107 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21588-201ENSMUST00000180074 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21780-201ENSMUST00000180128 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21572-201ENSMUST00000180134 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm21529-201ENSMUST00000180175 498 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm27028-201ENSMUST00000182303 399 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm29104-201ENSMUST00000186304 222 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm29370-202ENSMUST00000187476 499 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm37000-201ENSMUST00000193058 428 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm37029-201ENSMUST00000195773 239 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm18341-201ENSMUST00000197538 622 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm44282-201ENSMUST00000203199 190 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm44084-201ENSMUST00000203947 409 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm7948-201ENSMUST00000212607 844 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm18346-201ENSMUST00000216782 325 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.32□□□□□ -2.04
Ufd1P70362 AC124489.2-201ENSMUST00000223930 589 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ufd1P70362 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Ufd1P70362 Gm22810-201ENSMUST00000082741 158 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm22508-201ENSMUST00000082772 110 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.32□□□□□ -2.04
Ufd1P70362 Gm25169-201ENSMUST00000104190 129 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm14943-201ENSMUST00000118056 546 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm11460-201ENSMUST00000118200 361 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm11407-201ENSMUST00000120362 1058 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm11389-201ENSMUST00000121407 430 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm22597-201ENSMUST00000157602 80 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm23476-201ENSMUST00000158881 274 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ufd1P70362 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm27220-201ENSMUST00000183453 262 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm27245-201ENSMUST00000184385 376 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Mir6986-201ENSMUST00000184483 58 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm29216-201ENSMUST00000187117 492 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm28299-201ENSMUST00000189908 339 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.31□□□□□ -2.04
Ufd1P70362 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm43550-201ENSMUST00000200597 303 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm44472-201ENSMUST00000204922 943 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm34779-201ENSMUST00000210036 263 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm5373-201ENSMUST00000212113 1050 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.31□□□□□ -2.04
Ufd1P70362 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.31□□□□□ -2.04
Ufd1P70362 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Gm17890-201ENSMUST00000221419 757 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.31□□□□□ -2.04
Ufd1P70362 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Ufd1P70362 Gm25466-201ENSMUST00000103995 132 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm25833-201ENSMUST00000104137 133 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Ufd1P70362 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm12191-201ENSMUST00000118307 348 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm14793-201ENSMUST00000118739 311 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm12878-201ENSMUST00000118744 332 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm9703-201ENSMUST00000119573 343 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm14049-201ENSMUST00000121009 636 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm16428-201ENSMUST00000121193 723 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm14389-201ENSMUST00000140453 241 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.3□□□□□ -2.04
Ufd1P70362 Gm24443-201ENSMUST00000157242 132 ntBASIC2.3□□□□□ -2.04
Ufd1P70362 Gm24730-201ENSMUST00000158228 117 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms