Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mir542-201ENSMUST00000102186 85 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm24855-201ENSMUST00000104848 97 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm12765-201ENSMUST00000117273 615 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm15268-201ENSMUST00000118845 352 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm16005-201ENSMUST00000120515 269 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm16533-201ENSMUST00000140035 228 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm6265-201ENSMUST00000149263 231 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.9□□□□□ -1.79
Hmgb1P63158 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm20689-201ENSMUST00000176033 279 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Hmgb1P63158 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm8747-201ENSMUST00000195392 751 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm9236-201ENSMUST00000196892 587 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm43529-201ENSMUST00000199178 412 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.9□□□□□ -1.79
Hmgb1P63158 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm45796-201ENSMUST00000212483 114 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Olfr197-201ENSMUST00000080031 926 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
Hmgb1P63158 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Hmgb1P63158 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.9□□□□□ -1.79
Hmgb1P63158 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Hmgb1P63158 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
Hmgb1P63158 Gm14810-201ENSMUST00000121628 486 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm5963-201ENSMUST00000143451 236 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm23752-201ENSMUST00000157584 115 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm23592-201ENSMUST00000157859 117 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm24997-201ENSMUST00000157910 105 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm27761-201ENSMUST00000184091 131 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm42832-201ENSMUST00000196361 745 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm43007-201ENSMUST00000197618 291 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm43227-201ENSMUST00000202239 677 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm45252-201ENSMUST00000211579 397 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.89□□□□□ -1.79
Hmgb1P63158 AC192333.2-201ENSMUST00000224771 196 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Hmgb1P63158 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.89□□□□□ -1.79
Hmgb1P63158 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb1P63158 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb1P63158 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm15183-201ENSMUST00000118933 348 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm23713-201ENSMUST00000157353 70 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm22615-201ENSMUST00000158102 70 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm23112-201ENSMUST00000158606 125 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm17072-201ENSMUST00000166673 658 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm26622-201ENSMUST00000180520 298 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Mir6963-201ENSMUST00000183535 71 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm29408-201ENSMUST00000187536 216 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm37550-201ENSMUST00000193230 463 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm15235-201ENSMUST00000200572 194 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm44459-201ENSMUST00000203926 160 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb1P63158 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.88□□□□□ -1.79
Hmgb1P63158 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb1P63158 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Hmgb1P63158 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Hmgb1P63158 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgb1P63158 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb1P63158 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb1P63158 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm12770-201ENSMUST00000121734 462 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm23775-201ENSMUST00000158991 249 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Hmgb1P63158 Mir6405-201ENSMUST00000184584 124 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm37239-201ENSMUST00000193510 141 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb1P63158 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm44294-201ENSMUST00000205090 728 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.87□□□□□ -1.79
Hmgb1P63158 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Hmgb1P63158 Gm10042-201ENSMUST00000079884 78 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms