Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm24458-201ENSMUST00000083204 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm23814-201ENSMUST00000083230 102 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm23815-201ENSMUST00000083231 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm25790-201ENSMUST00000083293 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm22295-201ENSMUST00000083311 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm25127-201ENSMUST00000083336 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm25583-201ENSMUST00000083413 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm24414-201ENSMUST00000083434 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm23095-201ENSMUST00000083446 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm24803-201ENSMUST00000083693 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm22580-201ENSMUST00000083727 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm24260-201ENSMUST00000083741 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm22682-201ENSMUST00000083854 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm25869-201ENSMUST00000083855 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm24693-201ENSMUST00000083885 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm26317-201ENSMUST00000083894 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm22798-201ENSMUST00000083992 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm26427-201ENSMUST00000093648 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm22444-201ENSMUST00000093693 108 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm16261-201ENSMUST00000096813 205 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Gm22170-201ENSMUST00000097247 107 ntBASIC2.12□□□□□ -2.07
Cux1P53564 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.11□□□□□ -2.07
Cux1P53564 Gm15125-201ENSMUST00000116185 800 ntBASIC2.11□□□□□ -2.07
Cux1P53564 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cux1P53564 Gm18855-201ENSMUST00000206689 570 ntBASIC2.11□□□□□ -2.07
Cux1P53564 AC154851.2-201ENSMUST00000222172 644 ntBASIC2.11□□□□□ -2.07
Cux1P53564 Gm8935-202ENSMUST00000105727 1959 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Gm6215-201ENSMUST00000119297 1386 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Gm14577-201ENSMUST00000121134 256 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Gm15488-201ENSMUST00000121682 670 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Gm19641-201ENSMUST00000188432 417 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Cux1P53564 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cux1P53564 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.1□□□□□ -2.07
Cux1P53564 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cux1P53564 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.1□□□□□ -2.07
Cux1P53564 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Cux1P53564 Gm22839-201ENSMUST00000158436 304 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Gm25971-201ENSMUST00000158953 286 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Gm23053-201ENSMUST00000175136 96 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Gm45048-201ENSMUST00000207058 429 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Gm9472-201ENSMUST00000221625 526 ntBASIC2.09□□□□□ -2.07
Cux1P53564 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Gm22507-201ENSMUST00000082773 160 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Gm24261-201ENSMUST00000083744 104 ntBASIC2.09□□□□□ -2.07
Cux1P53564 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Cux1P53564 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.09□□□□□ -2.07
Cux1P53564 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cux1P53564 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Cux1P53564 Gm24951-201ENSMUST00000102182 109 ntBASIC2.08□□□□□ -2.08
Cux1P53564 Gm23221-201ENSMUST00000158118 93 ntBASIC2.08□□□□□ -2.08
Cux1P53564 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Cux1P53564 Gm27921-201ENSMUST00000183968 108 ntBASIC2.08□□□□□ -2.08
Cux1P53564 Gm8502-201ENSMUST00000185708 901 ntBASIC2.08□□□□□ -2.08
Cux1P53564 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.08□□□□□ -2.08
Cux1P53564 Gm43124-201ENSMUST00000201878 278 ntBASIC2.08□□□□□ -2.08
Cux1P53564 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.08□□□□□ -2.08
Cux1P53564 AC101945.1-201ENSMUST00000226734 466 ntBASIC2.08□□□□□ -2.08
Cux1P53564 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Cux1P53564 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Cux1P53564 Gm25526-201ENSMUST00000104332 132 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm11693-201ENSMUST00000119625 565 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm6801-201ENSMUST00000190697 339 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm42834-201ENSMUST00000196845 256 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC2.07□□□□□ -2.08
Cux1P53564 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC2.07□□□□□ -2.08
Cux1P53564 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.07□□□□□ -2.08
Cux1P53564 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Mir344-201ENSMUST00000083634 95 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm24917-201ENSMUST00000083935 104 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Cux1P53564 Gm22658-201ENSMUST00000104196 155 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Cux1P53564 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm12137-201ENSMUST00000119565 346 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.07□□□□□ -2.08
Cux1P53564 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.07□□□□□ -2.08
Cux1P53564 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Cux1P53564 Gm16147-201ENSMUST00000162143 373 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm27656-201ENSMUST00000185055 80 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.07□□□□□ -2.08
Cux1P53564 Gm43510-201ENSMUST00000197922 353 ntBASIC2.07□□□□□ -2.08
Cux1P53564 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.07□□□□□ -2.08
Cux1P53564 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.07□□□□□ -2.08
Cux1P53564 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cux1P53564 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Cux1P53564 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Cux1P53564 Gm22469-201ENSMUST00000104118 133 ntBASIC2.06□□□□□ -2.08
Cux1P53564 Gm23015-201ENSMUST00000104145 128 ntBASIC2.06□□□□□ -2.08
Cux1P53564 Gm23441-201ENSMUST00000157268 127 ntBASIC2.06□□□□□ -2.08
Cux1P53564 Gm22963-201ENSMUST00000157960 91 ntBASIC2.06□□□□□ -2.08
Cux1P53564 Gm23476-201ENSMUST00000158881 274 ntBASIC2.06□□□□□ -2.08
Cux1P53564 Gm11395-201ENSMUST00000181011 499 ntBASIC2.06□□□□□ -2.08
Cux1P53564 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms