Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Shmt1P50431 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Shmt1P50431 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Shmt1P50431 Gm25801-201ENSMUST00000082638 106 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Gm25207-201ENSMUST00000093745 107 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.95□□□□□ -1.78
Shmt1P50431 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Shmt1P50431 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Shmt1P50431 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Shmt1P50431 Gm37642-201ENSMUST00000193166 1735 ntBASIC3.95□□□□□ -1.78
Shmt1P50431 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
Shmt1P50431 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Shmt1P50431 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Shmt1P50431 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Shmt1P50431 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
Shmt1P50431 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm6565-201ENSMUST00000121217 438 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm8244-201ENSMUST00000121254 264 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.94□□□□□ -1.78
Shmt1P50431 Gm22320-201ENSMUST00000157149 312 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm26187-201ENSMUST00000157693 101 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm17119-201ENSMUST00000163943 280 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm21960-201ENSMUST00000181924 452 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm37343-201ENSMUST00000192542 111 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm37617-201ENSMUST00000194309 159 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Shmt1P50431 Gm6059-201ENSMUST00000196903 340 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm44092-201ENSMUST00000204470 258 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.94□□□□□ -1.78
Shmt1P50431 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm33654-201ENSMUST00000221704 215 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm6462-201ENSMUST00000081488 304 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm23451-201ENSMUST00000083328 122 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Gm23741-201ENSMUST00000097237 171 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Shmt1P50431 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.94□□□□□ -1.78
Shmt1P50431 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Shmt1P50431 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Shmt1P50431 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Shmt1P50431 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Shmt1P50431 Gm24951-201ENSMUST00000102182 109 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.93□□□□□ -1.78
Shmt1P50431 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.93□□□□□ -1.78
Shmt1P50431 Gm23262-201ENSMUST00000158323 168 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Gm22435-201ENSMUST00000158552 128 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Gm4761-201ENSMUST00000178086 582 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Gm9022-202ENSMUST00000183285 483 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Mir6938-201ENSMUST00000184173 63 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.93□□□□□ -1.78
Shmt1P50431 Gm44825-201ENSMUST00000207557 150 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Gm44598-201ENSMUST00000207566 150 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.93□□□□□ -1.78
Shmt1P50431 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Shmt1P50431 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.93□□□□□ -1.78
Shmt1P50431 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Shmt1P50431 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Shmt1P50431 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Shmt1P50431 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Shmt1P50431 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm24683-201ENSMUST00000104840 88 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13046-201ENSMUST00000117391 501 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm11923-201ENSMUST00000118135 508 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm11429-201ENSMUST00000119089 144 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm15026-201ENSMUST00000119219 458 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm23602-201ENSMUST00000157258 132 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm24191-201ENSMUST00000157977 122 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm25977-201ENSMUST00000158697 85 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm26400-201ENSMUST00000175012 85 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm27903-201ENSMUST00000175482 126 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.92□□□□□ -1.78
Shmt1P50431 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm37029-201ENSMUST00000195773 239 ntBASIC3.92□□□□□ -1.78
Shmt1P50431 Gm46194-201ENSMUST00000218136 320 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms