Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Cdx2P43241 Mir410-201ENSMUST00000083563 81 ntBASIC1.85□□□□□ -2.11
Cdx2P43241 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.85□□□□□ -2.11
Cdx2P43241 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cdx2P43241 Gm23813-201ENSMUST00000175153 77 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 Mir7678-201ENSMUST00000185076 71 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Cdx2P43241 Gm45288-201ENSMUST00000210236 151 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 AC165284.1-201ENSMUST00000228614 458 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cdx2P43241 Gm25792-201ENSMUST00000083289 100 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 Gm25124-201ENSMUST00000083345 164 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 Gm23058-201ENSMUST00000093703 107 ntBASIC1.84□□□□□ -2.11
Cdx2P43241 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Cdx2P43241 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.84□□□□□ -2.12
Cdx2P43241 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cdx2P43241 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cdx2P43241 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cdx2P43241 Gm24907-201ENSMUST00000116932 128 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm12155-201ENSMUST00000121267 160 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm24478-201ENSMUST00000157439 158 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cdx2P43241 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm24925-201ENSMUST00000178157 107 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm18448-201ENSMUST00000186286 599 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm3489-201ENSMUST00000190083 528 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm23939-201ENSMUST00000082880 133 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm25402-201ENSMUST00000082966 131 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cdx2P43241 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Cdx2P43241 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Cdx2P43241 Gm43896-201ENSMUST00000203440 2032 ntBASIC1.83□□□□□ -2.12
Cdx2P43241 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Cdx2P43241 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm22494-201ENSMUST00000104495 128 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm22560-201ENSMUST00000157332 120 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm24857-201ENSMUST00000158061 310 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm20648-201ENSMUST00000175815 328 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm26864-201ENSMUST00000181346 156 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm37708-201ENSMUST00000192337 895 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm37119-201ENSMUST00000195691 389 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Igkv2-105-201ENSMUST00000196931 377 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm43676-201ENSMUST00000197532 540 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm17937-201ENSMUST00000197908 742 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm44657-201ENSMUST00000208568 450 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.82□□□□□ -2.12
Cdx2P43241 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cdx2P43241 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.82□□□□□ -2.12
Cdx2P43241 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.82□□□□□ -2.12
Cdx2P43241 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cdx2P43241 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.82□□□□□ -2.12
Cdx2P43241 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cdx2P43241 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Cdx2P43241 Gm25832-201ENSMUST00000104140 130 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm12640-201ENSMUST00000120097 310 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm12591-201ENSMUST00000122407 1177 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm27520-201ENSMUST00000184872 81 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm27979-201ENSMUST00000185126 56 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm28779-201ENSMUST00000189678 323 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm7858-201ENSMUST00000190177 622 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.81□□□□□ -2.12
Cdx2P43241 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC1.81□□□□□ -2.12
Cdx2P43241 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.81□□□□□ -2.12
Cdx2P43241 Gm43541-201ENSMUST00000197208 581 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm45049-201ENSMUST00000207586 591 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm18645-201ENSMUST00000209593 651 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm45240-201ENSMUST00000211437 674 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Gm23723-201ENSMUST00000082996 132 ntBASIC1.81□□□□□ -2.12
Cdx2P43241 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Cdx2P43241 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Cdx2P43241 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Cdx2P43241 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Cdx2P43241 Gm15159-201ENSMUST00000117062 764 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 n-R5s192-201ENSMUST00000122577 119 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.8□□□□□ -2.12
Cdx2P43241 Gm24552-201ENSMUST00000158646 103 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Gm8532-201ENSMUST00000179174 461 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Gm23714-201ENSMUST00000179259 105 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Mir6541-201ENSMUST00000183649 110 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Mir8116-201ENSMUST00000184134 97 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Cdx2P43241 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Cdx2P43241 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cdx2P43241 Snora69-201ENSMUST00000083708 131 ntBASIC1.8□□□□□ -2.12
Cdx2P43241 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.8□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms